RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TDRD3Q9H7E2 651 aaKnown RBP18.99■□□□□ 0.63
CHD3-205ENST00000449744 COPRSQ9NQ92 184 aa18.99■□□□□ 0.63
CHD3-205ENST00000449744 ZNF70Q9UC06 446 aaPredicted RBP18.99■□□□□ 0.63
CHD3-205ENST00000449744 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
CHD3-205ENST00000449744 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 GNAI2P04899 355 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
CHD3-205ENST00000449744 RASA3Q14644 834 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 GRIK5Q16478 980 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 SPDYE2Q495Y8 402 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 TEKT1Q969V4 418 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 GNL3LQ9NVN8 582 aaKnown RBP18.98■□□□□ 0.63
CHD3-205ENST00000449744 SAGE1Q9NXZ1 904 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 MAST3O60307 1309 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 AOX1Q06278 1338 aa18.98■□□□□ 0.63
CHD3-205ENST00000449744 TNNI2P48788 182 aa18.97■□□□□ 0.63
CHD3-205ENST00000449744 WDR66Q8TBY9 1149 aa18.97■□□□□ 0.63
CHD3-205ENST00000449744 RNF186Q9NXI6 227 aa18.97■□□□□ 0.63
CHD3-205ENST00000449744 SUGT1Q9Y2Z0 365 aa18.97■□□□□ 0.63
CHD3-205ENST00000449744 ZBED9Q6R2W3 1325 aa18.97■□□□□ 0.63
CHD3-205ENST00000449744 TRPA1O75762 1119 aa18.96■□□□□ 0.63
CHD3-205ENST00000449744 MTX1Q13505 466 aa18.96■□□□□ 0.63
CHD3-205ENST00000449744 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
CHD3-205ENST00000449744 FZD1Q9UP38 647 aa18.96■□□□□ 0.63
CHD3-205ENST00000449744 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
CHD3-205ENST00000449744 LDLRAD1Q5T700 205 aa18.95■□□□□ 0.62
CHD3-205ENST00000449744 NBPF12Q5TAG4 269 aaPredicted RBP18.95■□□□□ 0.62
CHD3-205ENST00000449744 FTSJ3Q8IY81 847 aaKnown RBP18.95■□□□□ 0.62
CHD3-205ENST00000449744 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
CHD3-205ENST00000449744 TMOD2Q9NZR1 351 aa18.95■□□□□ 0.62
CHD3-205ENST00000449744 AKAP11Q9UKA4 1901 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 TCP10L2B9ZVM9 353 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
CHD3-205ENST00000449744 MAP3K11Q16584 847 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 SLC10A4Q96EP9 437 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 MRIQ9BWK5 157 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 AKAP2Q9Y2D5 859 aa18.94■□□□□ 0.62
CHD3-205ENST00000449744 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
CHD3-205ENST00000449744 DENND2AQ9ULE3 1009 aa18.93■□□□□ 0.62
CHD3-205ENST00000449744 MYH13Q9UKX3 1938 aa18.93■□□□□ 0.62
CHD3-205ENST00000449744 SSC5DA1L4H1 1573 aa18.93■□□□□ 0.62
CHD3-205ENST00000449744 UNCXA6NJT0 531 aa18.92■□□□□ 0.62
CHD3-205ENST00000449744 SEMA3EO15041 775 aa18.92■□□□□ 0.62
CHD3-205ENST00000449744 PHKA1P46020 1223 aa18.92■□□□□ 0.62
CHD3-205ENST00000449744 SREBF2Q12772 1141 aa18.92■□□□□ 0.62
CHD3-205ENST00000449744 ADORA1P30542 326 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 TIMM10P62072 90 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 TFCP2Q12800 502 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
CHD3-205ENST00000449744 SPRYD7Q5W111 196 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 CCDC102BQ68D86 513 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 HHIPL2Q6UWX4 724 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 CASP8AP2Q9UKL3 1982 aa18.91■□□□□ 0.62
CHD3-205ENST00000449744 A0A1B0GUL7 405 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 USP2O75604 605 aaPredicted RBP18.9■□□□□ 0.62
CHD3-205ENST00000449744 LDHBP07195 334 aaKnown RBP18.9■□□□□ 0.62
CHD3-205ENST00000449744 TM4SF4P48230 202 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 CACNB3P54284 484 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 ITPRIPQ8IWB1 547 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 CLMNQ96JQ2 1002 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 TMEM39BQ9GZU3 492 aa18.9■□□□□ 0.62
CHD3-205ENST00000449744 PNMA6EA0A0J9YXQ4 647 aa18.89■□□□□ 0.61
CHD3-205ENST00000449744 DGKZQ13574 1117 aa18.89■□□□□ 0.61
CHD3-205ENST00000449744 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
CHD3-205ENST00000449744 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
CHD3-205ENST00000449744 ZGPATQ8N5A5 531 aaKnown RBP18.89■□□□□ 0.61
CHD3-205ENST00000449744 TEPSINQ96N21 525 aa18.89■□□□□ 0.61
CHD3-205ENST00000449744 NEUROD6Q96NK8 337 aa18.89■□□□□ 0.61
CHD3-205ENST00000449744 MANSC4A6NHS7 340 aaPredicted RBP18.88■□□□□ 0.61
CHD3-205ENST00000449744 ZBTB48P10074 688 aaPredicted RBP18.88■□□□□ 0.61
CHD3-205ENST00000449744 PRDX5P30044 214 aa18.88■□□□□ 0.61
CHD3-205ENST00000449744 XAGE2Q96GT9 111 aa18.88■□□□□ 0.61
CHD3-205ENST00000449744 WNK4Q96J92 1243 aa18.88■□□□□ 0.61
CHD3-205ENST00000449744 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
CHD3-205ENST00000449744 SALL1Q9NSC2 1324 aa18.88■□□□□ 0.61
CHD3-205ENST00000449744 TBC1D8O95759 1140 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 INHBEP58166 350 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 CDAN1Q8IWY9 1227 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
CHD3-205ENST00000449744 ZBTB22O15209 634 aa18.86■□□□□ 0.61
CHD3-205ENST00000449744 OS9Q13438 667 aaPredicted RBP18.86■□□□□ 0.61
CHD3-205ENST00000449744 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
CHD3-205ENST00000449744 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
CHD3-205ENST00000449744 ABCF2Q9UG63 623 aa18.86■□□□□ 0.61
CHD3-205ENST00000449744 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
CHD3-205ENST00000449744 ALDH1A1P00352 501 aa18.85■□□□□ 0.61
CHD3-205ENST00000449744 RLBP1P12271 317 aa18.85■□□□□ 0.61
CHD3-205ENST00000449744 ATP8B2P98198 1209 aa18.85■□□□□ 0.61
CHD3-205ENST00000449744 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
CHD3-205ENST00000449744 DZIP1Q86YF9 867 aaKnown RBP18.85■□□□□ 0.61
CHD3-205ENST00000449744 C1orf115Q9H7X2 142 aa18.85■□□□□ 0.61
CHD3-205ENST00000449744 ELP3Q9H9T3 547 aa18.85■□□□□ 0.61
CHD3-205ENST00000449744 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
CHD3-205ENST00000449744 ZBTB7BO15156 539 aaPredicted RBP18.84■□□□□ 0.61
CHD3-205ENST00000449744 MAP3K9P80192 1104 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms