RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
SHMT2-203ENST00000449049 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
SHMT2-203ENST00000449049 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
SHMT2-203ENST00000449049 RAD50Q92878 1312 aa16.96■□□□□ 0.31
SHMT2-203ENST00000449049 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.31
SHMT2-203ENST00000449049 A0A0D9SFI3 127 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 VIL1P09327 827 aaKnown RBP16.96■□□□□ 0.3
SHMT2-203ENST00000449049 SLFNL1Q499Z3 407 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.3
SHMT2-203ENST00000449049 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 APPBP2Q92624 585 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 MXD3Q9BW11 206 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 BACH2Q9BYV9 841 aa16.96■□□□□ 0.3
SHMT2-203ENST00000449049 PSMD14O00487 310 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 RAD17O75943 681 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 CXCL9Q07325 125 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 HELLSQ9NRZ9 838 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
SHMT2-203ENST00000449049 SGSM2O43147 1006 aa16.94■□□□□ 0.3
SHMT2-203ENST00000449049 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
SHMT2-203ENST00000449049 IL25Q9H293 177 aa16.94■□□□□ 0.3
SHMT2-203ENST00000449049 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
SHMT2-203ENST00000449049 NAA16Q6N069 864 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-203ENST00000449049 RSBN1LQ6PCB5 846 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-203ENST00000449049 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
SHMT2-203ENST00000449049 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 MAST3O60307 1309 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 CYP7A1P22680 504 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
SHMT2-203ENST00000449049 GSTO1P78417 241 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 TNIP1Q15025 636 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 SEC62Q99442 399 aaKnown RBP16.93■□□□□ 0.3
SHMT2-203ENST00000449049 GMLQ99445 158 aa16.93■□□□□ 0.3
SHMT2-203ENST00000449049 M0R2C6 588 aa16.92■□□□□ 0.3
SHMT2-203ENST00000449049 PUS7LQ9H0K6 701 aaKnown RBP16.92■□□□□ 0.3
SHMT2-203ENST00000449049 RNF181Q9P0P0 153 aa16.92■□□□□ 0.3
SHMT2-203ENST00000449049 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
SHMT2-203ENST00000449049 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
SHMT2-203ENST00000449049 AGBL3Q8NEM8 1001 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-203ENST00000449049 MYH2Q9UKX2 1941 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 SEC24BO95487 1268 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-203ENST00000449049 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 GAKO14976 1311 aa16.91■□□□□ 0.3
SHMT2-203ENST00000449049 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 LDHCP07864 332 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 CCDC171Q6TFL3 1326 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-203ENST00000449049 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
SHMT2-203ENST00000449049 CCDC129Q6ZRS4 1044 aa16.9■□□□□ 0.3
SHMT2-203ENST00000449049 RPS12P25398 132 aaKnown RBP16.89■□□□□ 0.29
SHMT2-203ENST00000449049 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.29
SHMT2-203ENST00000449049 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
SHMT2-203ENST00000449049 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-203ENST00000449049 GPAA1O43292 621 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 REC8O95072 547 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 MIGA1Q8NAN2 632 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 RIOK1Q9BRS2 568 aaKnown RBP16.88■□□□□ 0.29
SHMT2-203ENST00000449049 SERPINA10Q9UK55 444 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
SHMT2-203ENST00000449049 MAGEB6P1A0A0J9YX57 407 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 AIDAQ96BJ3 306 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
SHMT2-203ENST00000449049 GPR75-ASB3A0A0A6YYF3 556 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 MBD4O95243 580 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 CRKP46108 304 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 SCNN1DP51172 638 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 PPP4CP60510 307 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 GPC2Q8N158 579 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 LCORLQ8N3X6 602 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
SHMT2-203ENST00000449049 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
SHMT2-203ENST00000449049 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
SHMT2-203ENST00000449049 MMP14P50281 582 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 DPF2Q92785 391 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 AATFQ9NY61 560 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHMT2-203ENST00000449049 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
SHMT2-203ENST00000449049 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 CERS3Q8IU89 383 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 ZDHHC15Q96MV8 337 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
SHMT2-203ENST00000449049 BAG3O95817 575 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 BTDP43251 543 aa16.85■□□□□ 0.29
SHMT2-203ENST00000449049 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-203ENST00000449049 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
SHMT2-203ENST00000449049 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms