RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RPS12P25398 132 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 EPS15P42566 896 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 TNNT3P45378 269 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 SLC9C2Q5TAH2 1124 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 C1orf228Q6PIY5 440 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 KAT14Q9H8E8 782 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 Q3C1V9 767 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCDC157Q569K6 752 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 INTS3Q68E01 1043 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 ADARB2Q9NS39 739 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 CD163L1Q9NR16 1453 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 TSHZ2Q9NRE2 1034 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 U3KPZ7 1027 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 PTPDC1A2A3K4 754 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 CHL1O00533 1208 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 KCTD2Q14681 263 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 NLRP10Q86W26 655 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 CDCA7LQ96GN5 454 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 CAMKK2Q96RR4 588 aa6.58□□□□□ -1.36
CDC42BPA-209ENST00000448940 ANKRD35Q8N283 1001 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZHX1Q9UKY1 873 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 SLC4A4Q9Y6R1 1079 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 IQGAP3Q86VI3 1631 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 RAG1P15918 1043 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 HACE1Q8IYU2 909 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 GYS1P13807 737 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 KIF5BP33176 963 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 SUSD4Q5VX71 490 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 RICTORQ6R327 1708 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 DDNO94850 711 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 GMPSP49915 693 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 CHRNDQ07001 517 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 CAPNS2Q96L46 248 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 ECHDC1Q9NTX5 307 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 PRAMEF22A3QJZ6 481 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 RSPH3Q86UC2 560 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 GOPCQ9HD26 462 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 PHLPP1O60346 1717 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF213O14771 459 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 HOMER2Q9NSB8 354 aa6.57□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCDC196A0A1B0GTZ2 297 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 TPM2P07951 284 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 DESP17661 470 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ATP2B1P20020 1258 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ITPK1Q13572 414 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 FAM161BQ96MY7 647 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 POLIQ9UNA4 740 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 PPRC1Q5VV67 1664 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 BACH1O14867 736 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 GNAT2P19087 354 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ATN1P54259 1190 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF784Q8NCA9 323 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 NKX2-3Q8TAU0 364 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 NACA2Q9H009 215 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 USP14P54578 494 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 GGA3Q9NZ52 723 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 SSBP05455 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 PLCB2Q00722 1185 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 FSTL1Q12841 308 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 CATIPQ7Z7H3 387 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 TMEM57Q8N5G2 664 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 MIGA1Q8NAN2 632 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 UBE2OQ9C0C9 1292 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 SASH1O94885 1247 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 EIF5P55010 431 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 CFAP100Q494V2 611 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 MFSD6Q6ZSS7 791 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 NPC1L1Q9UHC9 1359 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF341Q9BYN7 854 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 ATP6V0A2Q9Y487 856 aa6.56□□□□□ -1.36
CDC42BPA-209ENST00000448940 TRIM75PA6NK02 468 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 NLRP5P59047 1200 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 FASTKD5Q7L8L6 764 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 SAP30BPQ9UHR5 308 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 GYG1P46976 350 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 NSMFQ6X4W1 530 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 PNMA2Q9UL42 364 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 RNASELQ05823 741 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 CYP4F22Q6NT55 531 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 ESR2Q92731 530 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 ZNF594Q96JF6 807 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCL15-CCL14A0A0B4J2E2 113 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 MAP4K4O95819 1239 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 RRP1P56182 461 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 SLFN5Q08AF3 891 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 CCL15Q16663 113 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 MAGEB6Q8N7X4 407 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 FERMT2Q96AC1 680 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 NCAPD2Q15021 1401 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 CDKL5O76039 1030 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 WRNIP1Q96S55 665 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 NOC2LQ9Y3T9 749 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 PLEKHG2Q9H7P9 1386 aa6.55□□□□□ -1.36
CDC42BPA-209ENST00000448940 KRT32Q14532 448 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms