RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SPDYE2Q495Y8 402 aa24.5■■□□□ 1.51
VCP-203ENST00000448530 DZIP1LQ8IYY4 767 aaKnown RBP24.5■■□□□ 1.51
VCP-203ENST00000448530 TDRD3Q9H7E2 651 aaKnown RBP24.5■■□□□ 1.51
VCP-203ENST00000448530 RNF186Q9NXI6 227 aa24.5■■□□□ 1.51
VCP-203ENST00000448530 ZNF70Q9UC06 446 aaPredicted RBP24.5■■□□□ 1.51
VCP-203ENST00000448530 MAST3O60307 1309 aa24.5■■□□□ 1.51
VCP-203ENST00000448530 HDLBPQ00341 1268 aaKnown RBP24.49■■□□□ 1.51
VCP-203ENST00000448530 RASA3Q14644 834 aa24.49■■□□□ 1.51
VCP-203ENST00000448530 TEKT1Q969V4 418 aa24.49■■□□□ 1.51
VCP-203ENST00000448530 CLUAP1Q96AJ1 413 aa24.49■■□□□ 1.51
VCP-203ENST00000448530 GNL3LQ9NVN8 582 aaKnown RBP24.49■■□□□ 1.51
VCP-203ENST00000448530 PA2G4Q9UQ80 394 aaKnown RBP24.49■■□□□ 1.51
VCP-203ENST00000448530 SRGAP3O43295 1099 aa24.48■■□□□ 1.51
VCP-203ENST00000448530 AOX1Q06278 1338 aa24.48■■□□□ 1.51
VCP-203ENST00000448530 WDR66Q8TBY9 1149 aa24.48■■□□□ 1.51
VCP-203ENST00000448530 COPRSQ9NQ92 184 aa24.48■■□□□ 1.51
VCP-203ENST00000448530 SUGT1Q9Y2Z0 365 aa24.48■■□□□ 1.51
VCP-203ENST00000448530 TNNI2P48788 182 aa24.47■■□□□ 1.51
VCP-203ENST00000448530 GRIK5Q16478 980 aa24.47■■□□□ 1.51
VCP-203ENST00000448530 LDLRAD1Q5T700 205 aa24.47■■□□□ 1.51
VCP-203ENST00000448530 ZKSCAN2Q63HK3 967 aa24.47■■□□□ 1.51
VCP-203ENST00000448530 GNAI2P04899 355 aa24.46■■□□□ 1.51
VCP-203ENST00000448530 MKRN3Q13064 507 aaKnown RBP24.46■■□□□ 1.51
VCP-203ENST00000448530 NBPF12Q5TAG4 269 aaPredicted RBP24.46■■□□□ 1.51
VCP-203ENST00000448530 SLC10A4Q96EP9 437 aa24.46■■□□□ 1.51
VCP-203ENST00000448530 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.46■■□□□ 1.51
VCP-203ENST00000448530 FZD1Q9UP38 647 aa24.46■■□□□ 1.51
VCP-203ENST00000448530 TCP10L2B9ZVM9 353 aa24.45■■□□□ 1.5
VCP-203ENST00000448530 IREB2P48200 963 aaKnown RBP24.45■■□□□ 1.5
VCP-203ENST00000448530 SREBF2Q12772 1141 aa24.45■■□□□ 1.5
VCP-203ENST00000448530 ABHD8Q96I13 439 aa24.45■■□□□ 1.5
VCP-203ENST00000448530 TMOD2Q9NZR1 351 aa24.45■■□□□ 1.5
VCP-203ENST00000448530 MAP3K11Q16584 847 aa24.44■■□□□ 1.5
VCP-203ENST00000448530 MRIQ9BWK5 157 aa24.44■■□□□ 1.5
VCP-203ENST00000448530 TNNQ9UQP3 1299 aa24.44■■□□□ 1.5
VCP-203ENST00000448530 SSC5DA1L4H1 1573 aa24.44■■□□□ 1.5
VCP-203ENST00000448530 UNCXA6NJT0 531 aa24.43■■□□□ 1.5
VCP-203ENST00000448530 MTX1Q13505 466 aa24.43■■□□□ 1.5
VCP-203ENST00000448530 ZDHHC15Q96MV8 337 aa24.43■■□□□ 1.5
VCP-203ENST00000448530 SPRYD7Q5W111 196 aa24.42■■□□□ 1.5
VCP-203ENST00000448530 AKAP2Q9Y2D5 859 aa24.42■■□□□ 1.5
VCP-203ENST00000448530 ZBED9Q6R2W3 1325 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 SEMA3EO15041 775 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 TM4SF4P48230 202 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 DGKZQ13574 1117 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 HHIPL2Q6UWX4 724 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 FTSJ3Q8IY81 847 aaKnown RBP24.41■■□□□ 1.5
VCP-203ENST00000448530 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 DENND2AQ9ULE3 1009 aa24.41■■□□□ 1.5
VCP-203ENST00000448530 ANKRD13AQ8IZ07 590 aa24.4■■□□□ 1.5
VCP-203ENST00000448530 CLMNQ96JQ2 1002 aa24.4■■□□□ 1.5
VCP-203ENST00000448530 USP2O75604 605 aaPredicted RBP24.39■■□□□ 1.49
VCP-203ENST00000448530 LDHBP07195 334 aaKnown RBP24.39■■□□□ 1.49
VCP-203ENST00000448530 ZBTB48P10074 688 aaPredicted RBP24.39■■□□□ 1.49
VCP-203ENST00000448530 PHKA1P46020 1223 aa24.39■■□□□ 1.49
VCP-203ENST00000448530 MCOLN1Q9GZU1 580 aa24.39■■□□□ 1.49
VCP-203ENST00000448530 TMEM39BQ9GZU3 492 aa24.39■■□□□ 1.49
VCP-203ENST00000448530 MANSC4A6NHS7 340 aaPredicted RBP24.38■■□□□ 1.49
VCP-203ENST00000448530 CACNB3P54284 484 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 TIMM10P62072 90 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 TFCP2Q12800 502 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 CCDC102BQ68D86 513 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 WNK4Q96J92 1243 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 TEPSINQ96N21 525 aa24.38■■□□□ 1.49
VCP-203ENST00000448530 A0A1B0GUL7 405 aa24.37■■□□□ 1.49
VCP-203ENST00000448530 ADORA1P30542 326 aa24.37■■□□□ 1.49
VCP-203ENST00000448530 INHBEP58166 350 aa24.37■■□□□ 1.49
VCP-203ENST00000448530 G3BP1Q13283 466 aaKnown RBP eCLIP24.37■■□□□ 1.493e-7■■■■□ 24.5
VCP-203ENST00000448530 FKBP1CQ5VVH2 108 aa24.37■■□□□ 1.49
VCP-203ENST00000448530 APOBEC3HQ6NTF7 200 aaKnown RBP24.37■■□□□ 1.49
VCP-203ENST00000448530 ZGPATQ8N5A5 531 aaKnown RBP24.37■■□□□ 1.49
VCP-203ENST00000448530 HOOK2Q96ED9 719 aa24.37■■□□□ 1.49
VCP-203ENST00000448530 CCDC85CA6NKD9 419 aa24.36■■□□□ 1.49
VCP-203ENST00000448530 TBC1D8O95759 1140 aa24.36■■□□□ 1.49
VCP-203ENST00000448530 MVPQ14764 893 aaKnown RBP24.36■■□□□ 1.49
VCP-203ENST00000448530 FAM83AQ86UY5 434 aa24.36■■□□□ 1.49
VCP-203ENST00000448530 NEUROD6Q96NK8 337 aa24.36■■□□□ 1.49
VCP-203ENST00000448530 SALL1Q9NSC2 1324 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 ALDH1A1P00352 501 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 PRDX5P30044 214 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 GORABQ5T7V8 394 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 CDAN1Q8IWY9 1227 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 XAGE2Q96GT9 111 aa24.35■■□□□ 1.49
VCP-203ENST00000448530 PNMA6EA0A0J9YXQ4 647 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 DIXDC1Q155Q3 683 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 ITPRIPQ8IWB1 547 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 DAGLAQ9Y4D2 1042 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 CSADQ9Y600 493 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 OTOFQ9HC10 1997 aa24.34■■□□□ 1.49
VCP-203ENST00000448530 ELP3Q9H9T3 547 aa24.33■■□□□ 1.49
VCP-203ENST00000448530 ZBTB22O15209 634 aa24.32■■□□□ 1.48
VCP-203ENST00000448530 MAP3K9P80192 1104 aa24.32■■□□□ 1.48
VCP-203ENST00000448530 RASGRF1Q13972 1273 aa24.32■■□□□ 1.48
VCP-203ENST00000448530 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
VCP-203ENST00000448530 ABCF2Q9UG63 623 aa24.32■■□□□ 1.48
VCP-203ENST00000448530 PDS5AQ29RF7 1337 aaKnown RBP24.32■■□□□ 1.48
VCP-203ENST00000448530 AK9Q5TCS8 1911 aa24.31■■□□□ 1.48
VCP-203ENST00000448530 OS9Q13438 667 aaPredicted RBP24.31■■□□□ 1.48
VCP-203ENST00000448530 DCAF15Q66K64 600 aa24.31■■□□□ 1.48
VCP-203ENST00000448530 SPTY2D1Q68D10 685 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms