RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZDHHC3Q9NYG2 299 aa5.15□□□□□ -1.59
PMS1-216ENST00000447734 CNTN3Q9P232 1028 aa5.15□□□□□ -1.59
PMS1-216ENST00000447734 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.15□□□□□ -1.59
PMS1-216ENST00000447734 GPC6Q9Y625 555 aaPredicted RBP5.15□□□□□ -1.59
PMS1-216ENST00000447734 A0A1W2PP55 124 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 VIL1P09327 827 aaKnown RBP5.14□□□□□ -1.59
PMS1-216ENST00000447734 EDN3P14138 238 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 EPB42P16452 691 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 TATP17735 454 aaPredicted RBP5.14□□□□□ -1.59
PMS1-216ENST00000447734 CNGA1P29973 690 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 CRKP46108 304 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 CAMK2GQ13555 558 aaPredicted RBP5.14□□□□□ -1.59
PMS1-216ENST00000447734 TCEA2Q15560 299 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 TKFCQ3LXA3 575 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 FBXW10Q5XX13 1052 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 TPTE2Q6XPS3 522 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 BICDL1Q6ZP65 573 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 KRT26Q7Z3Y9 468 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 BTLAQ7Z6A9 289 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 PGBD3Q8N328 593 aa5.14□□□□□ -1.59
PMS1-216ENST00000447734 THAP3Q8WTV1 239 aaPredicted RBP5.14□□□□□ -1.59
PMS1-216ENST00000447734 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 XYLBO75191 536 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 CELA3AP09093 270 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 RHOQP17081 205 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 MCM4P33991 863 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 GIPRP48546 466 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 SEPT6Q14141 434 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 FXNQ16595 210 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 C4orf17Q53FE4 359 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 SLC27A3Q5K4L6 730 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 TTC39BQ5VTQ0 682 aaPredicted RBP5.13□□□□□ -1.59
PMS1-216ENST00000447734 LARP1BQ659C4 914 aaKnown RBP5.13□□□□□ -1.59
PMS1-216ENST00000447734 FAM196AQ6ZSG2 479 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 TICAM2Q86XR7 235 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 OR6P1Q8NGX9 317 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 C7orf43Q8WVR3 580 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 ZNF837Q96EG3 531 aaPredicted RBP5.13□□□□□ -1.59
PMS1-216ENST00000447734 PCGF6Q9BYE7 350 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 ABCB6Q9NP58 842 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 LATS2Q9NRM7 1088 aa5.13□□□□□ -1.59
PMS1-216ENST00000447734 TLR3O15455 904 aaKnown RBP5.12□□□□□ -1.59
PMS1-216ENST00000447734 ASMTLO95671 621 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 EVA1CP58658 441 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 RHBDL3P58872 404 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 EXOSC10Q01780 885 aaKnown RBP5.12□□□□□ -1.59
PMS1-216ENST00000447734 Q8N3U1 123 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 SYNPOQ8N3V7 929 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 ACDQ96AP0 544 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 KLRG1Q96E93 195 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 C8orf48Q96LL4 319 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 CEP44Q9C0F1 390 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 RBSNQ9H1K0 784 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 LIN7BQ9HAP6 207 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 KANSL3Q9P2N6 904 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 PLAAQ9Y263 795 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 ATP8A1Q9Y2Q0 1164 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 THRAP3Q9Y2W1 955 aaKnown RBP5.12□□□□□ -1.59
PMS1-216ENST00000447734 EID1Q9Y6B2 187 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 PTCH2Q9Y6C5 1203 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 IGF1RP08069 1367 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 ROBO2Q9HCK4 1378 aa5.12□□□□□ -1.59
PMS1-216ENST00000447734 KRBA1A5PL33 1030 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 LMNB1P20700 586 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 ZNF165P49910 485 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 CDKN1CP49918 316 aaPredicted RBP5.11□□□□□ -1.59
PMS1-216ENST00000447734 BIRC2Q13490 618 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 CWF19L2Q2TBE0 894 aaKnown RBP5.11□□□□□ -1.59
PMS1-216ENST00000447734 DALRD3Q5D0E6 543 aaKnown RBP5.11□□□□□ -1.59
PMS1-216ENST00000447734 PEAR1Q5VY43 1037 aaPredicted RBP5.11□□□□□ -1.59
PMS1-216ENST00000447734 TTBK2Q6IQ55 1244 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 AGMOQ6ZNB7 445 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 NLRP13Q86W25 1043 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 JAMLQ86YT9 394 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 WDR75Q8IWA0 830 aaKnown RBP5.11□□□□□ -1.59
PMS1-216ENST00000447734 PSMG3-AS1Q96PY0 264 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 ZFYVE1Q9HBF4 777 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 MBIPQ9NS73 344 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 PFDN2Q9UHV9 154 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 CD2APQ9Y5K6 639 aa5.11□□□□□ -1.59
PMS1-216ENST00000447734 PHF20L1A8MW92 1017 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 CREB3O43889 395 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 DIAPH1O60610 1272 aaKnown RBP5.1□□□□□ -1.59
PMS1-216ENST00000447734 GJB6O95452 261 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 EGFRP00533 1210 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 BCRP11274 1271 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 TFE3P19532 575 aaPredicted RBP5.1□□□□□ -1.59
PMS1-216ENST00000447734 GPC1P35052 558 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 PHKA2P46019 1235 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 SSRP1Q08945 709 aaKnown RBP5.1□□□□□ -1.59
PMS1-216ENST00000447734 DBN1Q16643 649 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 BRDTQ58F21 947 aaPredicted RBP5.1□□□□□ -1.59
PMS1-216ENST00000447734 LRRC69Q6ZNQ3 347 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 PRICKLE2Q7Z3G6 844 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 TRIM42Q8IWZ5 723 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 JMYQ8N9B5 988 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 CHAC2Q8WUX2 184 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 RPS6KC1Q96S38 1066 aa5.1□□□□□ -1.59
PMS1-216ENST00000447734 LRRC3Q9BY71 257 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms