RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 LIG1P18858 919 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 ARGLU1Q9NWB6 273 aaPredicted RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 CRNKL1Q9BZJ0 848 aaKnown RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 PRC1O43663 620 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 RXRBP28702 533 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 NAA30Q147X3 362 aaPredicted RBP13.04□□□□□ -0.32
PTCH2-203ENST00000447098 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
PTCH2-203ENST00000447098 SMC2O95347 1197 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 LDHCP07864 332 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 TTLL5Q6EMB2 1281 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 GJD4Q96KN9 370 aaPredicted RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 CDKL5O76039 1030 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
PTCH2-203ENST00000447098 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 NEMFO60524 1076 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 ATP5JP18859 108 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 ANKRD7Q92527 254 aa13.03□□□□□ -0.32
PTCH2-203ENST00000447098 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 CCDC102BQ68D86 513 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 NAT10Q9H0A0 1025 aaKnown RBP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 MRVI1Q9Y6F6 885 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 NCAPD2Q15021 1401 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 B4E1Z4 1266 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 LDHBP07195 334 aaKnown RBP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 CHRNDQ07001 517 aa13.02□□□□□ -0.32
PTCH2-203ENST00000447098 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.32
PTCH2-203ENST00000447098 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 SLC27A2O14975 620 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 AATFQ9NY61 560 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTCH2-203ENST00000447098 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
PTCH2-203ENST00000447098 LARGE1O95461 756 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 NCOA5Q9HCD5 579 aaKnown RBP13.02□□□□□ -0.33
PTCH2-203ENST00000447098 STAP2Q9UGK3 403 aa13.02□□□□□ -0.33
PTCH2-203ENST00000447098 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 CFAP45Q9UL16 551 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 ELF2Q15723 593 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 JCADQ9P266 1359 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 MEGF6O75095 1541 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 PDE8BO95263 885 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 WTAPQ15007 396 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 TTLL11Q8NHH1 800 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 APPBP2Q92624 585 aa13.01□□□□□ -0.33
PTCH2-203ENST00000447098 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
PTCH2-203ENST00000447098 SLU7O95391 586 aaKnown RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 CEP57L1Q8IYX8 460 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 AOX1Q06278 1338 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 AP5Z1O43299 807 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 GGA1Q9UJY5 639 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 H7C1W4 665 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 CTIFO43310 598 aaKnown RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 PDE4BQ07343 736 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 ME3Q16798 604 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
PTCH2-203ENST00000447098 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
PTCH2-203ENST00000447098 ZBTB43O43298 467 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 GPS2Q13227 327 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 CACTINQ8WUQ7 758 aaKnown RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 MYL10Q9BUA6 226 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 CAVIN2O95810 425 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 PXDNQ92626 1479 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
PTCH2-203ENST00000447098 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 POLA2Q14181 598 aa12.99□□□□□ -0.33
PTCH2-203ENST00000447098 STX1AQ16623 288 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms