RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CFAP100Q494V2 611 aa26.89■■□□□ 1.9
APOE-204ENST00000446996 HHIPL2Q6UWX4 724 aa26.89■■□□□ 1.9
APOE-204ENST00000446996 ECM29Q5VYK3 1845 aa26.88■■□□□ 1.89
APOE-204ENST00000446996 MAP1SQ66K74 1059 aaPredicted RBP26.88■■□□□ 1.89
APOE-204ENST00000446996 CDC37L1Q7L3B6 337 aa26.88■■□□□ 1.89
APOE-204ENST00000446996 DCPSQ96C86 337 aaKnown RBP26.88■■□□□ 1.89
APOE-204ENST00000446996 SMC5Q8IY18 1101 aa26.87■■□□□ 1.89
APOE-204ENST00000446996 TEKT1Q969V4 418 aa26.87■■□□□ 1.89
APOE-204ENST00000446996 SPDYE2BA6NHP3 402 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 SMARCA5O60264 1052 aaPredicted RBP26.86■■□□□ 1.89
APOE-204ENST00000446996 SPDYE6P0CI01 402 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 PRDX5P30044 214 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 CRKP46108 304 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 NBPF9Q3BBW0 867 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 PASKQ96RG2 1323 aa26.86■■□□□ 1.89
APOE-204ENST00000446996 MYO1BO43795 1136 aa26.85■■□□□ 1.89
APOE-204ENST00000446996 ERICH6Q7L0X2 663 aa26.85■■□□□ 1.89
APOE-204ENST00000446996 SLF2Q8IX21 1173 aa26.85■■□□□ 1.89
APOE-204ENST00000446996 ABCF2Q9UG63 623 aa26.85■■□□□ 1.89
APOE-204ENST00000446996 RBM5P52756 815 aaKnown RBP eCLIP26.84■■□□□ 1.89
APOE-204ENST00000446996 PI16Q6UXB8 463 aa26.84■■□□□ 1.89
APOE-204ENST00000446996 FAM163AQ96GL9 167 aaPredicted RBP26.84■■□□□ 1.89
APOE-204ENST00000446996 PRMT6Q96LA8 375 aaPredicted RBP26.84■■□□□ 1.89
APOE-204ENST00000446996 ZDHHC15Q96MV8 337 aa26.84■■□□□ 1.89
APOE-204ENST00000446996 GGA3Q9NZ52 723 aa26.84■■□□□ 1.89
APOE-204ENST00000446996 ZBTB47Q9UFB7 747 aaPredicted RBP26.84■■□□□ 1.89
APOE-204ENST00000446996 IGHDP01880 384 aa26.83■■□□□ 1.89
APOE-204ENST00000446996 ATP5JP18859 108 aa26.83■■□□□ 1.89
APOE-204ENST00000446996 ANGEL2Q5VTE6 544 aaKnown RBP26.83■■□□□ 1.89
APOE-204ENST00000446996 CYP2E1P05181 493 aaPredicted RBP26.82■■□□□ 1.88
APOE-204ENST00000446996 ZAP70P43403 619 aa26.82■■□□□ 1.88
APOE-204ENST00000446996 TMED8Q6PL24 325 aaPredicted RBP26.82■■□□□ 1.88
APOE-204ENST00000446996 SULF1Q8IWU6 871 aa26.82■■□□□ 1.88
APOE-204ENST00000446996 SNRKQ9NRH2 765 aa26.82■■□□□ 1.88
APOE-204ENST00000446996 MYH2Q9UKX2 1941 aa26.82■■□□□ 1.88
APOE-204ENST00000446996 TRPM7Q96QT4 1865 aa26.81■■□□□ 1.88
APOE-204ENST00000446996 ANKRD45Q5TZF3 282 aa26.81■■□□□ 1.88
APOE-204ENST00000446996 KRT26Q7Z3Y9 468 aa26.81■■□□□ 1.88
APOE-204ENST00000446996 APOBEC3FQ8IUX4 373 aaKnown RBP26.81■■□□□ 1.88
APOE-204ENST00000446996 LDHCP07864 332 aa26.8■■□□□ 1.88
APOE-204ENST00000446996 APLP1P51693 650 aa26.8■■□□□ 1.88
APOE-204ENST00000446996 TTF1Q15361 905 aaPredicted RBP26.8■■□□□ 1.88
APOE-204ENST00000446996 DZIP1Q86YF9 867 aaKnown RBP26.8■■□□□ 1.88
APOE-204ENST00000446996 GPATCH3Q96I76 525 aa26.8■■□□□ 1.88
APOE-204ENST00000446996 GLIS2Q9BZE0 524 aaPredicted RBP26.8■■□□□ 1.88
APOE-204ENST00000446996 ECHDC1Q9NTX5 307 aa26.8■■□□□ 1.88
APOE-204ENST00000446996 LRP2BPQ9P2M1 347 aa26.8■■□□□ 1.88
APOE-204ENST00000446996 ASTN2O75129 1339 aaPredicted RBP26.8■■□□□ 1.88
APOE-204ENST00000446996 GSTO1P78417 241 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 SPDYE2Q495Y8 402 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 APOBEC3HQ6NTF7 200 aaKnown RBP26.79■■□□□ 1.88
APOE-204ENST00000446996 TBC1D9Q6ZT07 1266 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 USP48Q86UV5 1035 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 NSUN4Q96CB9 384 aaKnown RBP26.79■■□□□ 1.88
APOE-204ENST00000446996 PCDHAC2Q9Y5I4 1007 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 GAKO14976 1311 aa26.79■■□□□ 1.88
APOE-204ENST00000446996 DAGLAQ9Y4D2 1042 aa26.78■■□□□ 1.88
APOE-204ENST00000446996 TTC41PQ6P2S7 1318 aa26.78■■□□□ 1.88
APOE-204ENST00000446996 MECOMQ03112 1051 aa26.77■■□□□ 1.88
APOE-204ENST00000446996 HAUS7Q99871 368 aa26.77■■□□□ 1.88
APOE-204ENST00000446996 RAI14Q9P0K7 980 aa26.77■■□□□ 1.88
APOE-204ENST00000446996 ZNF70Q9UC06 446 aaPredicted RBP26.77■■□□□ 1.88
APOE-204ENST00000446996 MYO5AQ9Y4I1 1855 aaKnown RBP26.76■■□□□ 1.88
APOE-204ENST00000446996 DOCK2Q92608 1830 aa26.76■■□□□ 1.88
APOE-204ENST00000446996 TNFAIP1Q13829 316 aa26.76■■□□□ 1.87
APOE-204ENST00000446996 DIXDC1Q155Q3 683 aa26.76■■□□□ 1.87
APOE-204ENST00000446996 FKBP1CQ5VVH2 108 aa26.76■■□□□ 1.87
APOE-204ENST00000446996 BCL11AQ9H165 835 aa26.76■■□□□ 1.87
APOE-204ENST00000446996 TDRD3Q9H7E2 651 aaKnown RBP26.76■■□□□ 1.87
APOE-204ENST00000446996 PPP2R3BQ9Y5P8 575 aa26.76■■□□□ 1.87
APOE-204ENST00000446996 MAP4K4O95819 1239 aaPredicted RBP26.75■■□□□ 1.87
APOE-204ENST00000446996 PIH1D3Q9NQM4 214 aaKnown RBP26.75■■□□□ 1.87
APOE-204ENST00000446996 MAST2Q6P0Q8 1798 aa26.75■■□□□ 1.87
APOE-204ENST00000446996 MROH7-TTC4A0A0A0MT08 1334 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 SALL3Q9BXA9 1300 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 NUCB1Q02818 461 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 ZNF384Q8TF68 577 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 BOLA2Q9H3K6 86 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 TMOD2Q9NZR1 351 aa26.74■■□□□ 1.87
APOE-204ENST00000446996 GPR75-ASB3A0A0A6YYF3 556 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 ADM5C9JUS6 153 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 TRAF5O00463 557 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 ERC2O15083 957 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 MAP3K12Q12852 859 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 CREBZFQ9NS37 354 aa26.73■■□□□ 1.87
APOE-204ENST00000446996 AOX1Q06278 1338 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 CLRN2A0PK11 232 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 TMEM88BA6NKF7 163 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 NEFLP07196 543 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 TNNI2P48788 182 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 NAA16Q6N069 864 aaPredicted RBP26.72■■□□□ 1.87
APOE-204ENST00000446996 CHD1LQ86WJ1 897 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 ANTXR1Q9H6X2 564 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 PAG1Q9NWQ8 432 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 STAP2Q9UGK3 403 aa26.72■■□□□ 1.87
APOE-204ENST00000446996 MX1P20591 662 aa26.71■■□□□ 1.87
APOE-204ENST00000446996 FAM83AQ86UY5 434 aa26.71■■□□□ 1.87
APOE-204ENST00000446996 CDCA5Q96FF9 252 aa26.71■■□□□ 1.87
APOE-204ENST00000446996 DNAJC2Q99543 621 aaKnown RBP26.71■■□□□ 1.87
APOE-204ENST00000446996 DEFB129Q9H1M3 183 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms