RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 NEMFO60524 1076 aa20.26■□□□□ 0.83
ATG9A-215ENST00000446716 RXRBP28702 533 aa20.26■□□□□ 0.83
ATG9A-215ENST00000446716 CCDC102AQ96A19 550 aa20.26■□□□□ 0.83
ATG9A-215ENST00000446716 GBP3Q9H0R5 595 aa20.26■□□□□ 0.83
ATG9A-215ENST00000446716 PKD2L1Q9P0L9 805 aa20.26■□□□□ 0.83
ATG9A-215ENST00000446716 METP08581 1390 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 LOC102724428A0A0B4J2F2 783 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 SIK1P57059 783 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 TMEM87BQ96K49 555 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 EFCAB6Q5THR3 1501 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 CRACR2AQ9BSW2 395 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
ATG9A-215ENST00000446716 ZSCAN30Q86W11 494 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 IL17REQ8NFR9 667 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 GTF2IP78347 998 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 BRDTQ58F21 947 aaPredicted RBP20.25■□□□□ 0.83
ATG9A-215ENST00000446716 NLGN1Q8N2Q7 840 aa20.25■□□□□ 0.83
ATG9A-215ENST00000446716 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 DNM1Q05193 864 aaKnown RBP20.24■□□□□ 0.83
ATG9A-215ENST00000446716 INSRP06213 1382 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 KCNQ3O43525 872 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 FAM212AQ96EL1 285 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 CTSWP56202 376 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 MAPKAPK5Q8IW41 473 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 SLC1A4P43007 532 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 LETM2Q2VYF4 491 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 FERMT1Q9BQL6 677 aa20.24■□□□□ 0.83
ATG9A-215ENST00000446716 TRMT1Q9NXH9 659 aaKnown RBP20.24■□□□□ 0.83
ATG9A-215ENST00000446716 NOD1Q9Y239 953 aa20.23■□□□□ 0.83
ATG9A-215ENST00000446716 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
ATG9A-215ENST00000446716 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
ATG9A-215ENST00000446716 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
ATG9A-215ENST00000446716 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
ATG9A-215ENST00000446716 HSP90AA4PQ58FG1 418 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 DPY19L2Q6NUT2 758 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 PNMA6EA0A0J9YXQ4 647 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 TRIM37O94972 964 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 ZAP70P43403 619 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
ATG9A-215ENST00000446716 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
ATG9A-215ENST00000446716 ACTN2P35609 894 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 UBASH3AP57075 661 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 CNKSR1Q969H4 720 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 USP48Q86UV5 1035 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 USPL1Q5W0Q7 1092 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 CPXCR1Q8N123 301 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 TTC16Q8NEE8 873 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 OTUD7AQ8TE49 926 aaPredicted RBP20.21■□□□□ 0.83
ATG9A-215ENST00000446716 MRVI1Q9Y6F6 885 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 MAGI2Q86UL8 1455 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 GOPCQ9HD26 462 aa20.21■□□□□ 0.83
ATG9A-215ENST00000446716 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
ATG9A-215ENST00000446716 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.83
ATG9A-215ENST00000446716 TEKT1Q969V4 418 aa20.2■□□□□ 0.83
ATG9A-215ENST00000446716 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.83
ATG9A-215ENST00000446716 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 ANGEL1Q9UNK9 670 aaKnown RBP20.2■□□□□ 0.82
ATG9A-215ENST00000446716 NLRP1Q9C000 1473 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 ADCY5O95622 1261 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.2■□□□□ 0.826e-6■□□□□ 8.9
ATG9A-215ENST00000446716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.2■□□□□ 0.826e-6■□□□□ 10.2
ATG9A-215ENST00000446716 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 RBM10P98175 930 aaKnown RBP20.2■□□□□ 0.82
ATG9A-215ENST00000446716 PLIN2Q99541 437 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 ZBED4O75132 1171 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 GLT8D2Q9H1C3 349 aa20.2■□□□□ 0.82
ATG9A-215ENST00000446716 RTL1A6NKG5 1358 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 DEXIO95424 95 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 IFI16Q16666 785 aaKnown RBP20.19■□□□□ 0.82
ATG9A-215ENST00000446716 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 NAA15Q9BXJ9 866 aaKnown RBP20.19■□□□□ 0.82
ATG9A-215ENST00000446716 USP40Q9NVE5 1235 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 CPA1P15085 419 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 SNX21Q969T3 373 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 IFFO1Q0D2I5 559 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 MAP9Q49MG5 647 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 V9GY48 417 aaPredicted RBP20.19■□□□□ 0.82
ATG9A-215ENST00000446716 KIAA0754O94854 1291 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 ATP2B4P23634 1241 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
ATG9A-215ENST00000446716 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
ATG9A-215ENST00000446716 IRX3P78415 501 aaPredicted RBP20.18■□□□□ 0.82
ATG9A-215ENST00000446716 NSMFQ6X4W1 530 aa20.18■□□□□ 0.82
ATG9A-215ENST00000446716 GTPBP4Q9BZE4 634 aaKnown RBP20.18■□□□□ 0.82
ATG9A-215ENST00000446716 PLXNC1O60486 1568 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms