RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 MYH3P11055 1940 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 CYB5R4Q7L1T6 521 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 ANKRD18AQ8IVF6 992 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 DACT1Q9NYF0 836 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 RAI14Q9P0K7 980 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 CCNL1Q9UK58 526 aaPredicted RBP19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 MB21D2Q8IYB1 491 aaPredicted RBP19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 NAPBQ9H115 298 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
LAPTM4B-201ENST00000445593 SMIM22K7EJ46 135 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 POLR3DP05423 398 aaPredicted RBP19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 KLRK1P26718 216 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 RESTQ13127 1097 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 LCORLQ8N3X6 602 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 SLC4A8Q2Y0W8 1093 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 NFXL1Q6ZNB6 911 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 NBPF5PQ86XG9 351 aaPredicted RBP19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 AIFM3Q96NN9 605 aa19.74■□□□□ 0.75
LAPTM4B-201ENST00000445593 TAF1P21675 1872 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 NEDD4P46934 1319 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 COL4A1P02462 1669 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 TDO2P48775 406 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 CCDC82Q8N4S0 544 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 SDR42E1Q8WUS8 393 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 STRBPQ96SI9 672 aaKnown RBP19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 EPB41L4AQ9HCS5 686 aaPredicted RBP19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 TFCP2L1Q9NZI6 479 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 LAMA4Q16363 1823 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 ZPR1O75312 459 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 ADD1P35611 737 aaKnown RBP19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 UBE3CQ15386 1083 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 SMARCC2Q8TAQ2 1214 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 SLC4A4Q9Y6R1 1079 aa19.73■□□□□ 0.75
LAPTM4B-201ENST00000445593 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 AKAP11Q9UKA4 1901 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 TCRBV5S4A2TA0A5A2 114 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 PTMAP06454 111 aaKnown RBP19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 ABCC12Q96J65 1359 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 NRAPQ86VF7 1730 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 FDPSP14324 419 aaKnown RBP19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 VPS72Q15906 364 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 FBXW7Q969H0 707 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 BCL9LQ86UU0 1499 aa19.72■□□□□ 0.75
LAPTM4B-201ENST00000445593 MINDY4BA8MYZ0 360 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 UBE2Q2LH0YL09 131 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 CHAF1AQ13111 956 aaPredicted RBP19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 PHKBQ93100 1093 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 PGBD1Q96JS3 809 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 SETDB2Q96T68 719 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 ORC3Q9UBD5 711 aaPredicted RBP19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 CYP7A1P22680 504 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 ADGRA1Q86SQ6 560 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 IFNL3Q8IZI9 196 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 SCAND2PQ9GZW5 306 aaPredicted RBP19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 NR1I2O75469 434 aa19.71■□□□□ 0.75
LAPTM4B-201ENST00000445593 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 A0A087WWV3 80 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 USP28Q96RU2 1077 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 PPP1R9BQ96SB3 815 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 NUP62CLQ9H1M0 184 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 HPS5Q9UPZ3 1129 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 ZNF274Q96GC6 653 aaPredicted RBP19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
LAPTM4B-201ENST00000445593 WNK3Q9BYP7 1800 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 ERCC4Q92889 916 aaPredicted RBP19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 SPEF2Q9C093 1822 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 CMTR1Q8N1G2 835 aaKnown RBP19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 PAXIP1Q6ZW49 1069 aaPredicted RBP19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 CHMP4CQ96CF2 233 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 C8orf76Q96K31 380 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 AK7Q96M32 723 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 MINPP1Q9UNW1 487 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 TACC3Q9Y6A5 838 aa19.69■□□□□ 0.74
LAPTM4B-201ENST00000445593 NWD2Q9ULI1 1742 aa19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 CYP2D7A0A087X1C5 515 aa19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 ZNF512BQ96KM6 892 aaPredicted RBP19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 TNMDQ9H2S6 317 aa19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 TMEM67Q5HYA8 995 aa19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
LAPTM4B-201ENST00000445593 ME1P48163 572 aa19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 DYNLL1P63167 89 aaKnown RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 ARHGEF1Q92888 912 aaKnown RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 GSG1L2A8MUP6 293 aa19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 IFIT3O14879 490 aaKnown RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 METAP2P50579 478 aaKnown RBP eCLIP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 ZNF830Q96NB3 372 aaPredicted RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 ANGEL1Q9UNK9 670 aaKnown RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 KIF3AQ9Y496 699 aa19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 PRDM1O75626 825 aa19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 GPR101Q96P66 508 aaPredicted RBP19.67■□□□□ 0.74
LAPTM4B-201ENST00000445593 PATL2C9JE40 543 aaKnown RBP19.66■□□□□ 0.74
LAPTM4B-201ENST00000445593 MSNP26038 577 aaKnown RBP19.66■□□□□ 0.74
LAPTM4B-201ENST00000445593 NLRP3Q96P20 1036 aa19.66■□□□□ 0.74
LAPTM4B-201ENST00000445593 ZSWIM5Q9P217 1185 aa19.66■□□□□ 0.74
LAPTM4B-201ENST00000445593 CLEC4GQ6UXB4 293 aa19.66■□□□□ 0.74
LAPTM4B-201ENST00000445593 CDC27P30260 824 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms