RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 A0A0G2JLW4 131 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 TM4SF1P30408 202 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 FAM84BQ96KN1 310 aaPredicted RBP18.49■□□□□ 0.55
SNX13-204ENST00000444712 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 NAPBQ9H115 298 aa18.49■□□□□ 0.55
SNX13-204ENST00000444712 CACNA1SQ13698 1873 aa18.48■□□□□ 0.55
SNX13-204ENST00000444712 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
SNX13-204ENST00000444712 SCRN1Q12765 414 aa18.48■□□□□ 0.55
SNX13-204ENST00000444712 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
SNX13-204ENST00000444712 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
SNX13-204ENST00000444712 PRC1O43663 620 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 DHX16O60231 1041 aaKnown RBP18.47■□□□□ 0.55
SNX13-204ENST00000444712 GYS1P13807 737 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 MRE11P49959 708 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 FAM184AQ8NB25 1140 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
SNX13-204ENST00000444712 CNNM2Q9H8M5 875 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 LEMD3Q9Y2U8 911 aa18.47■□□□□ 0.55
SNX13-204ENST00000444712 MYH15Q9Y2K3 1946 aa18.46■□□□□ 0.55
SNX13-204ENST00000444712 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
SNX13-204ENST00000444712 PRR5LQ6MZQ0 368 aa18.46■□□□□ 0.55
SNX13-204ENST00000444712 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.55
SNX13-204ENST00000444712 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
SNX13-204ENST00000444712 ABCF2Q9UG63 623 aa18.46■□□□□ 0.55
SNX13-204ENST00000444712 DUOX1Q9NRD9 1551 aa18.46■□□□□ 0.55
SNX13-204ENST00000444712 CYP7A1P22680 504 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 PDIA3P30101 505 aaKnown RBP18.45■□□□□ 0.54
SNX13-204ENST00000444712 TXNRD1Q16881 649 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
SNX13-204ENST00000444712 GPT2Q8TD30 523 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 ARMT1Q9H993 441 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 RGPD3A6NKT7 1758 aaPredicted RBP18.45■□□□□ 0.54
SNX13-204ENST00000444712 RGPD4Q7Z3J3 1758 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 ZNF445P59923 1031 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
SNX13-204ENST00000444712 SLC4A4Q9Y6R1 1079 aa18.45■□□□□ 0.54
SNX13-204ENST00000444712 XDHP47989 1333 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 PLSCR1O15162 318 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 SERPINB2P05120 415 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 KRT23Q9C075 422 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 IQSEC3Q9UPP2 1182 aaPredicted RBP18.44■□□□□ 0.54
SNX13-204ENST00000444712 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 TDO2P48775 406 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 KRT85P78386 507 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 CRY2Q49AN0 593 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 TBC1D10CQ8IV04 446 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
SNX13-204ENST00000444712 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
SNX13-204ENST00000444712 ZSCAN16Q9H4T2 348 aaPredicted RBP18.44■□□□□ 0.54
SNX13-204ENST00000444712 EPB41L4AQ9HCS5 686 aaPredicted RBP18.44■□□□□ 0.54
SNX13-204ENST00000444712 NAP1L2Q9ULW6 460 aaPredicted RBP18.44■□□□□ 0.54
SNX13-204ENST00000444712 H3BQV1 296 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 UBE2HP62256 183 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
SNX13-204ENST00000444712 CDC37L1Q7L3B6 337 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 CHST3Q7LGC8 479 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 NBPF3Q9H094 633 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 RNF41Q9H4P4 317 aaPredicted RBP18.43■□□□□ 0.54
SNX13-204ENST00000444712 ANGEL1Q9UNK9 670 aaKnown RBP18.43■□□□□ 0.54
SNX13-204ENST00000444712 CNPY2Q9Y2B0 182 aa18.43■□□□□ 0.54
SNX13-204ENST00000444712 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 JAK2O60674 1132 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 ANTXR2P58335 489 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 ZSCAN23Q3MJ62 389 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
SNX13-204ENST00000444712 CHAMP1Q96JM3 812 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 KLF18A0A0U1RQI7 1052 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 FOXD4L6Q3SYB3 417 aaPredicted RBP18.42■□□□□ 0.54
SNX13-204ENST00000444712 AKNAD1Q5T1N1 836 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 FOXD4L3Q6VB84 417 aaPredicted RBP18.42■□□□□ 0.54
SNX13-204ENST00000444712 C15orf52Q6ZUT6 534 aaKnown RBP18.42■□□□□ 0.54
SNX13-204ENST00000444712 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 GRPEL1Q9HAV7 217 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 NRXN2Q9P2S2 1712 aa18.42■□□□□ 0.54
SNX13-204ENST00000444712 LRRC37AA6NMS7 1700 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 CCT2P78371 535 aaKnown RBP18.41■□□□□ 0.54
SNX13-204ENST00000444712 MFSD6Q6ZSS7 791 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 STAG1Q8WVM7 1258 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 LAMB1P07942 1786 aa18.41■□□□□ 0.54
SNX13-204ENST00000444712 GOLGA8BA8MQT2 603 aa18.4■□□□□ 0.54
SNX13-204ENST00000444712 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
SNX13-204ENST00000444712 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
SNX13-204ENST00000444712 ELP1O95163 1332 aa18.4■□□□□ 0.54
SNX13-204ENST00000444712 IRS2Q9Y4H2 1338 aa18.4■□□□□ 0.54
SNX13-204ENST00000444712 SH2B2O14492 632 aaPredicted RBP18.4■□□□□ 0.54
SNX13-204ENST00000444712 DNM1Q05193 864 aaKnown RBP18.4■□□□□ 0.54
SNX13-204ENST00000444712 ZNF804AQ7Z570 1209 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms