RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
SSBP3-208ENST00000444533 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
SSBP3-208ENST00000444533 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
SSBP3-208ENST00000444533 MRIQ9BWK5 157 aa17.17■□□□□ 0.34
SSBP3-208ENST00000444533 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
SSBP3-208ENST00000444533 IGHDP01880 384 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 LDHCP07864 332 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 ATP5JP18859 108 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 CRKP46108 304 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 MTMR14Q8NCE2 650 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
SSBP3-208ENST00000444533 TMOD2Q9NZR1 351 aa17.16■□□□□ 0.34
SSBP3-208ENST00000444533 PRDX5P30044 214 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 ZAP70P43403 619 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 HHIPL2Q6UWX4 724 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 COL1A1P02452 1464 aaPredicted RBP17.15■□□□□ 0.34
SSBP3-208ENST00000444533 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
SSBP3-208ENST00000444533 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 WNT10BO00744 389 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 POTEJP0CG39 1038 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 MX1P20591 662 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
SSBP3-208ENST00000444533 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
SSBP3-208ENST00000444533 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
SSBP3-208ENST00000444533 CCDC136Q96JN2 1154 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
SSBP3-208ENST00000444533 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
SSBP3-208ENST00000444533 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
SSBP3-208ENST00000444533 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-208ENST00000444533 NUCB1Q02818 461 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 TNFAIP1Q13829 316 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
SSBP3-208ENST00000444533 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
SSBP3-208ENST00000444533 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 KRT26Q7Z3Y9 468 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■□□□ 11.4
SSBP3-208ENST00000444533 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
SSBP3-208ENST00000444533 EGFRP00533 1210 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
SSBP3-208ENST00000444533 TNNI2P48788 182 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 NAA16Q6N069 864 aaPredicted RBP17.12■□□□□ 0.33
SSBP3-208ENST00000444533 HAUS7Q99871 368 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
SSBP3-208ENST00000444533 GOLIM4O00461 696 aa17.11■□□□□ 0.33
SSBP3-208ENST00000444533 BAG3O95817 575 aa17.11■□□□□ 0.33
SSBP3-208ENST00000444533 MECOMQ03112 1051 aa17.11■□□□□ 0.33
SSBP3-208ENST00000444533 GRIK5Q16478 980 aa17.11■□□□□ 0.33
SSBP3-208ENST00000444533 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
SSBP3-208ENST00000444533 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-208ENST00000444533 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-208ENST00000444533 NF2P35240 595 aa17.1■□□□□ 0.33
SSBP3-208ENST00000444533 DIXDC1Q155Q3 683 aa17.1■□□□□ 0.33
SSBP3-208ENST00000444533 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
SSBP3-208ENST00000444533 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-208ENST00000444533 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
SSBP3-208ENST00000444533 PLCG2P16885 1265 aa17.09■□□□□ 0.33
SSBP3-208ENST00000444533 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
SSBP3-208ENST00000444533 NSUN4Q96CB9 384 aaKnown RBP17.09■□□□□ 0.33
SSBP3-208ENST00000444533 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-208ENST00000444533 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
SSBP3-208ENST00000444533 DAGLAQ9Y4D2 1042 aa17.09■□□□□ 0.33
SSBP3-208ENST00000444533 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
SSBP3-208ENST00000444533 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-208ENST00000444533 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
SSBP3-208ENST00000444533 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-208ENST00000444533 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-208ENST00000444533 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
SSBP3-208ENST00000444533 ZNF70Q9UC06 446 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-208ENST00000444533 PPP2R3BQ9Y5P8 575 aa17.08■□□□□ 0.32
SSBP3-208ENST00000444533 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
SSBP3-208ENST00000444533 AOX1Q06278 1338 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 CYP7A1P22680 504 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 BTDP43251 543 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 PDE1AP54750 535 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 TSHZ3Q63HK5 1081 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 USP40Q9NVE5 1235 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 STAP2Q9UGK3 403 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
SSBP3-208ENST00000444533 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 GAKO14976 1311 aa17.06■□□□□ 0.32
SSBP3-208ENST00000444533 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms