RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
HDLBP-221ENST00000444092 KAZALD1Q96I82 304 aa12.65□□□□□ -0.38
HDLBP-221ENST00000444092 BICC1Q9H694 974 aaKnown RBP12.65□□□□□ -0.38
HDLBP-221ENST00000444092 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-221ENST00000444092 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
HDLBP-221ENST00000444092 CRHR2Q13324 411 aa12.64□□□□□ -0.39
HDLBP-221ENST00000444092 OTOP1Q7RTM1 612 aa12.64□□□□□ -0.39
HDLBP-221ENST00000444092 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
HDLBP-221ENST00000444092 OPTNQ96CV9 577 aa12.64□□□□□ -0.39
HDLBP-221ENST00000444092 UTYO14607 1347 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 GJA5P36382 358 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 FBXO33Q7Z6M2 555 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 TMEM39BQ9GZU3 492 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 CSADQ9Y600 493 aa12.63□□□□□ -0.39
HDLBP-221ENST00000444092 KIAA0100Q14667 2235 aaKnown RBP12.63□□□□□ -0.39
HDLBP-221ENST00000444092 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-221ENST00000444092 PDE8BO95263 885 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
HDLBP-221ENST00000444092 SP3Q02447 781 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-221ENST00000444092 INTS3Q68E01 1043 aaKnown RBP12.62□□□□□ -0.39
HDLBP-221ENST00000444092 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
HDLBP-221ENST00000444092 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 TEPSINQ96N21 525 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 PTPN18Q99952 460 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 TMOD2Q9NZR1 351 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 PTPRCP08575 1304 aa12.62□□□□□ -0.39
HDLBP-221ENST00000444092 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
HDLBP-221ENST00000444092 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-221ENST00000444092 GTF2A2P52657 109 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-221ENST00000444092 GRIK5Q16478 980 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 CCL15Q16663 113 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-221ENST00000444092 ANKRD44Q8N8A2 993 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 MAST3O60307 1309 aa12.61□□□□□ -0.39
HDLBP-221ENST00000444092 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
HDLBP-221ENST00000444092 BCAMP50895 628 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 CACNB3P54284 484 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 VGLL4Q14135 290 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDLBP-221ENST00000444092 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
HDLBP-221ENST00000444092 E9PSI1 815 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
HDLBP-221ENST00000444092 VGLL2Q8N8G2 317 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 CENPFP49454 3210 aa12.59□□□□□ -0.39
HDLBP-221ENST00000444092 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 SLC5A1P13866 664 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 FAM83AQ86UY5 434 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 ZDHHC15Q96MV8 337 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 MRIQ9BWK5 157 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
HDLBP-221ENST00000444092 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 EYA2O00167 538 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 CETPP11597 493 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 FKBP1CQ5VVH2 108 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 LPIN2Q92539 896 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
HDLBP-221ENST00000444092 FGFR2P21802 821 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 KIF22Q14807 665 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 APOBEC3HQ6NTF7 200 aaKnown RBP12.56□□□□□ -0.4
HDLBP-221ENST00000444092 NBPF11Q86T75 865 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-221ENST00000444092 ARMC5Q96C12 935 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 ZNF341Q9BYN7 854 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 SNCAIPQ9Y6H5 919 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 HTTP42858 3142 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 MYH2Q9UKX2 1941 aa12.56□□□□□ -0.4
HDLBP-221ENST00000444092 SNAPC2Q13487 334 aa12.55□□□□□ -0.4
HDLBP-221ENST00000444092 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
HDLBP-221ENST00000444092 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
HDLBP-221ENST00000444092 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
HDLBP-221ENST00000444092 SIL1Q9H173 461 aa12.55□□□□□ -0.4
HDLBP-221ENST00000444092 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms