RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 FGFR2P21802 821 aa20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 NBPF12Q5TAG4 269 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 ZNF296Q8WUU4 475 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 SSC5DA1L4H1 1573 aa20.42■□□□□ 0.86
CTDSP1-204ENST00000443891 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 OTUD7BQ6GQQ9 843 aa20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 LPIN2Q92539 896 aa20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 TEKT1Q969V4 418 aa20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 CDCA7LQ96GN5 454 aa20.41■□□□□ 0.86
CTDSP1-204ENST00000443891 UBTFL1P0CB47 393 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-204ENST00000443891 FKBP1CQ5VVH2 108 aa20.4■□□□□ 0.86
CTDSP1-204ENST00000443891 TDRD3Q9H7E2 651 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-204ENST00000443891 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.86
CTDSP1-204ENST00000443891 ZBTB22O15209 634 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 FKTNO75072 461 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 CIAO1O76071 339 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 SLC5A1P13866 664 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 MKRN3Q13064 507 aaKnown RBP20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 IFNL1Q8IU54 200 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 HOOK2Q96ED9 719 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 ZDHHC15Q96MV8 337 aa20.39■□□□□ 0.85
CTDSP1-204ENST00000443891 BCAMP50895 628 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 CHAF1AQ13111 956 aaPredicted RBP20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 HHIPL2Q6UWX4 724 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 TEPSINQ96N21 525 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 TMOD2Q9NZR1 351 aa20.38■□□□□ 0.85
CTDSP1-204ENST00000443891 AOX1Q06278 1338 aa20.37■□□□□ 0.85
CTDSP1-204ENST00000443891 TESPA1A2RU30 521 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-204ENST00000443891 FAM83AQ86UY5 434 aa20.37■□□□□ 0.85
CTDSP1-204ENST00000443891 CLMNQ96JQ2 1002 aa20.37■□□□□ 0.85
CTDSP1-204ENST00000443891 FBXO46Q6PJ61 603 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-204ENST00000443891 CEP126Q9P2H0 1117 aa20.36■□□□□ 0.85
CTDSP1-204ENST00000443891 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-204ENST00000443891 FZD1Q9UP38 647 aa20.36■□□□□ 0.85
CTDSP1-204ENST00000443891 IQSEC3Q9UPP2 1182 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-204ENST00000443891 TCP10L2B9ZVM9 353 aa20.35■□□□□ 0.85
CTDSP1-204ENST00000443891 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
CTDSP1-204ENST00000443891 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
CTDSP1-204ENST00000443891 GNL3LQ9NVN8 582 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-204ENST00000443891 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
CTDSP1-204ENST00000443891 LAMB1P07942 1786 aa20.34■□□□□ 0.85
CTDSP1-204ENST00000443891 SEMA3EO15041 775 aa20.34■□□□□ 0.85
CTDSP1-204ENST00000443891 IL15P40933 162 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-204ENST00000443891 CSADQ9Y600 493 aa20.34■□□□□ 0.85
CTDSP1-204ENST00000443891 RARSP54136 660 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-204ENST00000443891 GRIK5Q16478 980 aa20.33■□□□□ 0.85
CTDSP1-204ENST00000443891 APOBEC3HQ6NTF7 200 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-204ENST00000443891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■□□□□ 9.3
CTDSP1-204ENST00000443891 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.85
CTDSP1-204ENST00000443891 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
CTDSP1-204ENST00000443891 RPAP1Q9BWH6 1393 aaPredicted RBP20.33■□□□□ 0.84
CTDSP1-204ENST00000443891 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 GNAI3P08754 354 aa20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 ATP2B3Q16720 1220 aa20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 OPTNQ96CV9 577 aa20.32■□□□□ 0.84
CTDSP1-204ENST00000443891 SALL1Q9NSC2 1324 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 IPO8O15397 1037 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 GJA5P36382 358 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 GTF2A2P52657 109 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 DCAF15Q66K64 600 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 DENND2AQ9ULE3 1009 aa20.31■□□□□ 0.84
CTDSP1-204ENST00000443891 MS4A4AQ96JQ5 239 aa20.3■□□□□ 0.84
CTDSP1-204ENST00000443891 R3HDMLQ9H3Y0 253 aa20.3■□□□□ 0.84
CTDSP1-204ENST00000443891 ELP3Q9H9T3 547 aa20.3■□□□□ 0.84
CTDSP1-204ENST00000443891 LRRFIP2Q9Y608 721 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-204ENST00000443891 VGLL4Q14135 290 aa20.29■□□□□ 0.84
CTDSP1-204ENST00000443891 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-204ENST00000443891 ZCCHC17Q9NP64 241 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-204ENST00000443891 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 WDHD1O75717 1129 aaPredicted RBP20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 MTX1Q13505 466 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 ARHGEF6Q15052 776 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 ERO1BQ86YB8 467 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 FAM151AQ8WW52 585 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 PTPN18Q99952 460 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 SIL1Q9H173 461 aa20.28■□□□□ 0.84
CTDSP1-204ENST00000443891 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 SOX10P56693 466 aa20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 CDAN1Q8IWY9 1227 aa20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 MEIS3Q99687 375 aa20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 AKAP2Q9Y2D5 859 aa20.27■□□□□ 0.84
CTDSP1-204ENST00000443891 SP3Q02447 781 aa20.26■□□□□ 0.83
CTDSP1-204ENST00000443891 CRHR2Q13324 411 aa20.26■□□□□ 0.83
CTDSP1-204ENST00000443891 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
CTDSP1-204ENST00000443891 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
CTDSP1-204ENST00000443891 CCL15-CCL14A0A0B4J2E2 113 aa20.25■□□□□ 0.83
CTDSP1-204ENST00000443891 CETPP11597 493 aa20.25■□□□□ 0.83
CTDSP1-204ENST00000443891 CACNB3P54284 484 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms