RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 OTOFQ9HC10 1997 aa24.96■■□□□ 1.59
EDEM1-203ENST00000443790 CRKP46108 304 aa24.96■■□□□ 1.59
EDEM1-203ENST00000443790 IQSEC3Q9UPP2 1182 aaPredicted RBP24.96■■□□□ 1.59
EDEM1-203ENST00000443790 IGF2BP3O00425 579 aaKnown RBP eCLIP24.95■■□□□ 1.58
EDEM1-203ENST00000443790 PDE8BO95263 885 aa24.95■■□□□ 1.58
EDEM1-203ENST00000443790 CAVIN4Q5BKX8 364 aa24.95■■□□□ 1.58
EDEM1-203ENST00000443790 ANKRD13AQ8IZ07 590 aa24.95■■□□□ 1.58
EDEM1-203ENST00000443790 USP44Q9H0E7 712 aa24.95■■□□□ 1.58
EDEM1-203ENST00000443790 GJA5P36382 358 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 SLFN5Q08AF3 891 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 CHAF1AQ13111 956 aaPredicted RBP24.94■■□□□ 1.58
EDEM1-203ENST00000443790 GRIK5Q16478 980 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 FBXO46Q6PJ61 603 aaPredicted RBP24.94■■□□□ 1.58
EDEM1-203ENST00000443790 KLHDC4Q8TBB5 520 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 TBC1D22AQ8WUA7 517 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 TEPSINQ96N21 525 aa24.94■■□□□ 1.58
EDEM1-203ENST00000443790 CDAN1Q8IWY9 1227 aa24.93■■□□□ 1.58
EDEM1-203ENST00000443790 TCP10L2B9ZVM9 353 aa24.92■■□□□ 1.58
EDEM1-203ENST00000443790 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
EDEM1-203ENST00000443790 KIF16BQ96L93 1317 aa24.91■■□□□ 1.58
EDEM1-203ENST00000443790 TNNI2P48788 182 aa24.91■■□□□ 1.58
EDEM1-203ENST00000443790 HDLBPQ00341 1268 aaKnown RBP24.91■■□□□ 1.58
EDEM1-203ENST00000443790 ALDH1L2Q3SY69 923 aa24.91■■□□□ 1.58
EDEM1-203ENST00000443790 TMEM39BQ9GZU3 492 aa24.91■■□□□ 1.58
EDEM1-203ENST00000443790 BCAMP50895 628 aa24.9■■□□□ 1.58
EDEM1-203ENST00000443790 PUM3Q15397 648 aaKnown RBP24.9■■□□□ 1.58
EDEM1-203ENST00000443790 TEKT1Q969V4 418 aa24.9■■□□□ 1.58
EDEM1-203ENST00000443790 ELP3Q9H9T3 547 aa24.9■■□□□ 1.58
EDEM1-203ENST00000443790 FGFR2P21802 821 aa24.89■■□□□ 1.58
EDEM1-203ENST00000443790 OTUD7BQ6GQQ9 843 aa24.89■■□□□ 1.58
EDEM1-203ENST00000443790 OPTNQ96CV9 577 aa24.89■■□□□ 1.58
EDEM1-203ENST00000443790 HTTP42858 3142 aa24.89■■□□□ 1.57
EDEM1-203ENST00000443790 TESPA1A2RU30 521 aaPredicted RBP24.88■■□□□ 1.57
EDEM1-203ENST00000443790 IFIT1P09914 478 aaKnown RBP24.88■■□□□ 1.57
EDEM1-203ENST00000443790 RFX5P48382 616 aaPredicted RBP24.88■■□□□ 1.57
EDEM1-203ENST00000443790 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.88■■□□□ 1.57
EDEM1-203ENST00000443790 CDCA7LQ96GN5 454 aa24.88■■□□□ 1.57
EDEM1-203ENST00000443790 SMC4Q9NTJ3 1288 aa24.88■■□□□ 1.57
EDEM1-203ENST00000443790 EYA2O00167 538 aa24.87■■□□□ 1.57
EDEM1-203ENST00000443790 PTPN18Q99952 460 aa24.87■■□□□ 1.57
EDEM1-203ENST00000443790 MAST3O60307 1309 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 PDE4DIPQ5VU43 2346 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 CACNB3P54284 484 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 CRHR2Q13324 411 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 VGLL4Q14135 290 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.86■■□□□ 1.57
EDEM1-203ENST00000443790 ZDHHC15Q96MV8 337 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 MRIQ9BWK5 157 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 SUGT1Q9Y2Z0 365 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 TRIM17Q9Y577 477 aa24.86■■□□□ 1.57
EDEM1-203ENST00000443790 OTOP1Q7RTM1 612 aa24.85■■□□□ 1.57
EDEM1-203ENST00000443790 MS4A4AQ96JQ5 239 aa24.85■■□□□ 1.57
EDEM1-203ENST00000443790 SLC5A1P13866 664 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 MAP3K9P80192 1104 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 TRMT2AQ8IZ69 625 aaKnown RBP24.84■■□□□ 1.57
EDEM1-203ENST00000443790 CNKSR2Q8WXI2 1034 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 LPIN2Q92539 896 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 ERO1AQ96HE7 468 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 TMOD2Q9NZR1 351 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 CSADQ9Y600 493 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 MYH13Q9UKX3 1938 aa24.84■■□□□ 1.57
EDEM1-203ENST00000443790 APOBEC3HQ6NTF7 200 aaKnown RBP24.83■■□□□ 1.57
EDEM1-203ENST00000443790 ATG9AQ7Z3C6 839 aa24.83■■□□□ 1.57
EDEM1-203ENST00000443790 FAM83AQ86UY5 434 aa24.83■■□□□ 1.57
EDEM1-203ENST00000443790 UBTFL1P0CB47 393 aaPredicted RBP24.82■■□□□ 1.56
EDEM1-203ENST00000443790 FKBP1CQ5VVH2 108 aa24.82■■□□□ 1.56
EDEM1-203ENST00000443790 HHIPL2Q6UWX4 724 aa24.82■■□□□ 1.56
EDEM1-203ENST00000443790 CT47B1P0C2W7 299 aaPredicted RBP24.81■■□□□ 1.56
EDEM1-203ENST00000443790 WDR66Q8TBY9 1149 aa24.81■■□□□ 1.56
EDEM1-203ENST00000443790 CD99L2Q8TCZ2 262 aa24.81■■□□□ 1.56
EDEM1-203ENST00000443790 BRI3BPQ8WY22 251 aa24.81■■□□□ 1.56
EDEM1-203ENST00000443790 RPAP1Q9BWH6 1393 aaPredicted RBP24.8■■□□□ 1.56
EDEM1-203ENST00000443790 CCL15-CCL14A0A0B4J2E2 113 aa24.8■■□□□ 1.56
EDEM1-203ENST00000443790 GTF2A2P52657 109 aa24.8■■□□□ 1.56
EDEM1-203ENST00000443790 CCL15Q16663 113 aa24.8■■□□□ 1.56
EDEM1-203ENST00000443790 OTUD5Q96G74 571 aa24.8■■□□□ 1.56
EDEM1-203ENST00000443790 FBXO3Q9UK99 471 aa24.8■■□□□ 1.56
EDEM1-203ENST00000443790 SPDYE5A6NIY4 337 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 SP3Q02447 781 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 HOOK2Q96ED9 719 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 SIL1Q9H173 461 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 PCDH10Q9P2E7 1040 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 SNCAIPQ9Y6H5 919 aa24.79■■□□□ 1.56
EDEM1-203ENST00000443790 CIAO1O76071 339 aa24.78■■□□□ 1.56
EDEM1-203ENST00000443790 WRNIP1Q96S55 665 aa24.78■■□□□ 1.56
EDEM1-203ENST00000443790 NOB1Q9ULX3 412 aaKnown RBP24.78■■□□□ 1.56
EDEM1-203ENST00000443790 PTPN22Q9Y2R2 807 aa24.78■■□□□ 1.56
EDEM1-203ENST00000443790 TAF1CQ15572 869 aaPredicted RBP24.77■■□□□ 1.56
EDEM1-203ENST00000443790 ATP2B3Q16720 1220 aa24.77■■□□□ 1.56
EDEM1-203ENST00000443790 PRPF38BQ5VTL8 546 aaKnown RBP24.77■■□□□ 1.56
EDEM1-203ENST00000443790 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
EDEM1-203ENST00000443790 EFCC1Q9HA90 598 aa24.77■■□□□ 1.56
EDEM1-203ENST00000443790 CENPFP49454 3210 aa24.77■■□□□ 1.56
EDEM1-203ENST00000443790 CAP1Q01518 475 aa24.76■■□□□ 1.55
EDEM1-203ENST00000443790 DCAF15Q66K64 600 aa24.76■■□□□ 1.55
EDEM1-203ENST00000443790 FAM43AQ8N2R8 423 aa24.76■■□□□ 1.55
EDEM1-203ENST00000443790 CEP126Q9P2H0 1117 aa24.76■■□□□ 1.55
EDEM1-203ENST00000443790 LRRFIP2Q9Y608 721 aaKnown RBP24.76■■□□□ 1.55
EDEM1-203ENST00000443790 PRDX5P30044 214 aa24.75■■□□□ 1.55
EDEM1-203ENST00000443790 INTS3Q68E01 1043 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms