RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 JAKMIP2Q96AA8 810 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 NOP53Q9NZM5 478 aaKnown RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 NBPF7P0C2Y1 421 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 ST5P78524 1137 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 ACTN3Q08043 901 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 MLKLQ8NB16 471 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 CTNNBL1Q8WYA6 563 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 POLR3AO14802 1390 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 GOLGA8AA7E2F4 631 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 HGSO14964 777 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 PHLDB3Q6NSJ2 640 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 CCDC26Q8TAB7 109 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
LIN54-202ENST00000442461 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
LIN54-202ENST00000442461 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
LIN54-202ENST00000442461 PPARDQ03181 441 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 TAF11Q15544 211 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 MCUR1Q96AQ8 359 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
LIN54-202ENST00000442461 CIB2O75838 187 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ZNF202O95125 648 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 CUL4AQ13619 759 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.561e-6■■■■■ 154
LIN54-202ENST00000442461 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 DESP17661 470 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ATP5DP30049 168 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIN54-202ENST00000442461 FLIIQ13045 1269 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ARHGAP24Q8N264 748 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
LIN54-202ENST00000442461 ZNF213O14771 459 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 FYB1O15117 783 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 CEP104O60308 925 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 DNAJC8O75937 253 aaPredicted RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 BMP15O95972 392 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 CORO7P57737 925 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 PDE1CQ14123 709 aaPredicted RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 NBPF5PQ86XG9 351 aaPredicted RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 SCOCQ9UIL1 159 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 EFCAB5A4FU69 1503 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 KLF18A0A0U1RQI7 1052 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 GNPTABQ3T906 1256 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 KCTD16Q68DU8 428 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 CCDC197Q8NCU1 140 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 DHX58Q96C10 678 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 CAMSAP2Q08AD1 1489 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 GCFC2P16383 781 aaKnown RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 CCT6AP40227 531 aaKnown RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 DYNC1I2Q13409 638 aaKnown RBP11.57□□□□□ -0.56
LIN54-202ENST00000442461 TAOK1Q7L7X3 1001 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 MMRN2Q9H8L6 949 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 USH1CQ9Y6N9 552 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 UBA7P41226 1012 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 METAP2P50579 478 aaKnown RBP eCLIP11.57□□□□□ -0.56
LIN54-202ENST00000442461 OSBPL9Q96SU4 736 aa11.57□□□□□ -0.56
LIN54-202ENST00000442461 VAMP4O75379 141 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 COG7P83436 770 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 MCM10Q7L590 875 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 VPS37DQ86XT2 251 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 CEP126Q9P2H0 1117 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 NLRP5P59047 1200 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 HOMER2Q9NSB8 354 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 KLC4Q9NSK0 619 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 TCEAL9Q9UHQ7 104 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 FAF1Q9UNN5 650 aaPredicted RBP11.56□□□□□ -0.56
LIN54-202ENST00000442461 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 GSPT1P15170 499 aaKnown RBP11.56□□□□□ -0.56
LIN54-202ENST00000442461 AMPD3Q01432 767 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 TRAF1Q13077 416 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
LIN54-202ENST00000442461 VPS52Q8N1B4 723 aa11.56□□□□□ -0.56
LIN54-202ENST00000442461 PLVAPQ9BX97 442 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms