RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 PUS3Q9BZE2 481 aaKnown RBP13.87□□□□□ -0.19
GACAT3-202ENST00000442387 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
GACAT3-202ENST00000442387 MROH5Q6ZUA9 1318 aa13.87□□□□□ -0.19
GACAT3-202ENST00000442387 GTF2A2P52657 109 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.86□□□□□ -0.19
GACAT3-202ENST00000442387 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 ARMC5Q96C12 935 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 MS4A4AQ96JQ5 239 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 LAMB1P07942 1786 aa13.86□□□□□ -0.19
GACAT3-202ENST00000442387 CCL15-CCL14A0A0B4J2E2 113 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 MAP3K9P80192 1104 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 VGLL4Q14135 290 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 ARHGEF6Q15052 776 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 CCL15Q16663 113 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
GACAT3-202ENST00000442387 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 KAZALD1Q96I82 304 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 ZFYVE28Q9HCC9 887 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 RIPOR2Q9Y4F9 1068 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 CSADQ9Y600 493 aa13.85□□□□□ -0.19
GACAT3-202ENST00000442387 ANP32CO43423 234 aa13.84□□□□□ -0.19
GACAT3-202ENST00000442387 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
GACAT3-202ENST00000442387 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
GACAT3-202ENST00000442387 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
GACAT3-202ENST00000442387 TAF1CQ15572 869 aaPredicted RBP13.84□□□□□ -0.19
GACAT3-202ENST00000442387 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
GACAT3-202ENST00000442387 FBXO33Q7Z6M2 555 aa13.84□□□□□ -0.19
GACAT3-202ENST00000442387 TBC1D22AQ8WUA7 517 aa13.84□□□□□ -0.19
GACAT3-202ENST00000442387 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
GACAT3-202ENST00000442387 HDLBPQ00341 1268 aaKnown RBP13.83□□□□□ -0.2
GACAT3-202ENST00000442387 CAP1Q01518 475 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 GRIK5Q16478 980 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 TEKT1Q969V4 418 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
GACAT3-202ENST00000442387 UTYO14607 1347 aa13.83□□□□□ -0.2
GACAT3-202ENST00000442387 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 WDHD1O75717 1129 aaPredicted RBP13.82□□□□□ -0.2
GACAT3-202ENST00000442387 EN2P19622 333 aaPredicted RBP13.82□□□□□ -0.2
GACAT3-202ENST00000442387 CACNB3P54284 484 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 RABL6Q3YEC7 729 aaPredicted RBP13.82□□□□□ -0.2
GACAT3-202ENST00000442387 LRRC24Q50LG9 513 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 ZNF333Q96JL9 665 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 TMOD2Q9NZR1 351 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 OTOFQ9HC10 1997 aa13.82□□□□□ -0.2
GACAT3-202ENST00000442387 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 PDE8BO95263 885 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 SLC9C1Q4G0N8 1177 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 HABP4Q5JVS0 413 aaKnown RBP13.81□□□□□ -0.2
GACAT3-202ENST00000442387 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 SNCAIPQ9Y6H5 919 aa13.81□□□□□ -0.2
GACAT3-202ENST00000442387 CENPFP49454 3210 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 CETPP11597 493 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 BCAMP50895 628 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 KIF22Q14807 665 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 FAM83AQ86UY5 434 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 ERO1BQ86YB8 467 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 ANKRD44Q8N8A2 993 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 VGLL2Q8N8G2 317 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 ZDHHC15Q96MV8 337 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 MAST3O60307 1309 aa13.8□□□□□ -0.2
GACAT3-202ENST00000442387 MKI67P46013 3256 aaKnown RBP13.8□□□□□ -0.2
GACAT3-202ENST00000442387 TLR2O60603 784 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 SNAPC2Q13487 334 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 FKBP1CQ5VVH2 108 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 DCAF15Q66K64 600 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
GACAT3-202ENST00000442387 ZKSCAN4Q969J2 545 aaPredicted RBP13.79□□□□□ -0.2
GACAT3-202ENST00000442387 ZCCHC17Q9NP64 241 aaKnown RBP13.79□□□□□ -0.2
GACAT3-202ENST00000442387 SUGT1Q9Y2Z0 365 aa13.79□□□□□ -0.2
GACAT3-202ENST00000442387 BRCA2P51587 3418 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 BTBD19C9JJ37 291 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 IRF6O14896 467 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
GACAT3-202ENST00000442387 PPIL2Q13356 520 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
GACAT3-202ENST00000442387 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
GACAT3-202ENST00000442387 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
GACAT3-202ENST00000442387 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
GACAT3-202ENST00000442387 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
GACAT3-202ENST00000442387 PTPRCP08575 1304 aa13.77□□□□□ -0.21
GACAT3-202ENST00000442387 LACTBP83111 547 aaPredicted RBP13.77□□□□□ -0.21
GACAT3-202ENST00000442387 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
GACAT3-202ENST00000442387 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.21
GACAT3-202ENST00000442387 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
GACAT3-202ENST00000442387 MYCP01106 439 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms