RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 C8orf76Q96K31 380 aa18.8■□□□□ 0.6
NLE1-202ENST00000442241 RCOR1Q9UKL0 485 aa18.8■□□□□ 0.6
NLE1-202ENST00000442241 PDE6AP16499 860 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.79■□□□□ 0.6
NLE1-202ENST00000442241 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 SLIT2O94813 1529 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 SNW1Q13573 536 aaKnown RBP18.79■□□□□ 0.6
NLE1-202ENST00000442241 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 PCDHA7Q9UN72 937 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 AKAP11Q9UKA4 1901 aa18.79■□□□□ 0.6
NLE1-202ENST00000442241 PRKAB2O43741 272 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
NLE1-202ENST00000442241 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 NEDD4P46934 1319 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
NLE1-202ENST00000442241 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
NLE1-202ENST00000442241 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 CCDC186Q7Z3E2 898 aa18.78■□□□□ 0.6
NLE1-202ENST00000442241 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
NLE1-202ENST00000442241 BCAMP50895 628 aa18.77■□□□□ 0.6
NLE1-202ENST00000442241 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
NLE1-202ENST00000442241 ZKSCAN3Q9BRR0 538 aa18.77■□□□□ 0.6
NLE1-202ENST00000442241 NUP98P52948 1817 aa18.77■□□□□ 0.6
NLE1-202ENST00000442241 RASGRF1Q13972 1273 aa18.77■□□□□ 0.59
NLE1-202ENST00000442241 RBM43Q6ZSC3 357 aaKnown RBP18.77■□□□□ 0.59
NLE1-202ENST00000442241 DNAJC5Q9H3Z4 198 aa18.77■□□□□ 0.59
NLE1-202ENST00000442241 FBXO3Q9UK99 471 aa18.77■□□□□ 0.59
NLE1-202ENST00000442241 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.59
NLE1-202ENST00000442241 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
NLE1-202ENST00000442241 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 AIDAQ96BJ3 306 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 ZNF396Q96N95 335 aaPredicted RBP18.76■□□□□ 0.59
NLE1-202ENST00000442241 SPTLC3Q9NUV7 552 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 KIF3AQ9Y496 699 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 MBD4O95243 580 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
NLE1-202ENST00000442241 CDC27P30260 824 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 TRDNQ13061 729 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 SF3A1Q15459 793 aaKnown RBP18.76■□□□□ 0.59
NLE1-202ENST00000442241 ISM2Q6H9L7 571 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 CCDC82Q8N4S0 544 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 TOMM22Q9NS69 142 aa18.76■□□□□ 0.59
NLE1-202ENST00000442241 CRKLP46109 303 aaKnown RBP18.75■□□□□ 0.59
NLE1-202ENST00000442241 NDUFA8P51970 172 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 STK38Q15208 465 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 INTS5Q6P9B9 1019 aaKnown RBP18.75■□□□□ 0.59
NLE1-202ENST00000442241 ZNF34Q8IZ26 560 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 BCL11BQ9C0K0 894 aaPredicted RBP18.75■□□□□ 0.59
NLE1-202ENST00000442241 LRP6O75581 1613 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 BIN1O00499 593 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 KINO60870 393 aaKnown RBP18.75■□□□□ 0.59
NLE1-202ENST00000442241 ARID5BQ14865 1188 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 SPATA5Q8NB90 893 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
NLE1-202ENST00000442241 MYH7P12883 1935 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 MYH15Q9Y2K3 1946 aa18.75■□□□□ 0.59
NLE1-202ENST00000442241 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 ITPK1Q13572 414 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 PUM3Q15397 648 aaKnown RBP18.74■□□□□ 0.59
NLE1-202ENST00000442241 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
NLE1-202ENST00000442241 TCRBV5S4A2TA0A5A2 114 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 KCNQ2O43526 872 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 IL6STP40189 918 aaPredicted RBP18.74■□□□□ 0.59
NLE1-202ENST00000442241 ZNF75DP51815 510 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 FBXO18Q8NFZ0 1043 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
NLE1-202ENST00000442241 CCDC144BQ3MJ40 725 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 ENGASEQ8NFI3 743 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 STRBPQ96SI9 672 aaKnown RBP18.73■□□□□ 0.59
NLE1-202ENST00000442241 ZHX1Q9UKY1 873 aaPredicted RBP18.73■□□□□ 0.59
NLE1-202ENST00000442241 METAP2P50579 478 aaKnown RBP eCLIP18.73■□□□□ 0.59
NLE1-202ENST00000442241 EVCP57679 992 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 LPIN2Q92539 896 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 SDF4Q9BRK5 362 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 NIP7Q9Y221 180 aaKnown RBP eCLIP18.73■□□□□ 0.59
NLE1-202ENST00000442241 MYH3P11055 1940 aa18.73■□□□□ 0.59
NLE1-202ENST00000442241 NHSL1Q5SYE7 1610 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
NLE1-202ENST00000442241 EIF5P55010 431 aaKnown RBP18.72■□□□□ 0.59
NLE1-202ENST00000442241 TTF1Q15361 905 aaPredicted RBP18.72■□□□□ 0.59
NLE1-202ENST00000442241 DDB1Q16531 1140 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 ZSCAN25Q6NSZ9 544 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 ALG1Q9BT22 464 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
NLE1-202ENST00000442241 FGFR2P21802 821 aa18.71■□□□□ 0.59
NLE1-202ENST00000442241 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
NLE1-202ENST00000442241 IQCB1Q15051 598 aa18.71■□□□□ 0.59
NLE1-202ENST00000442241 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.59
NLE1-202ENST00000442241 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
NLE1-202ENST00000442241 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
NLE1-202ENST00000442241 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms