RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SPTY2D1Q68D10 685 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 HHIPL2Q6UWX4 724 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 AACSQ86V21 672 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 APOBEC3FQ8IUX4 373 aaKnown RBP18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 SPATA5Q8NB90 893 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 TEKT1Q969V4 418 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 IL1RAPL2Q9NP60 686 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 ASTN2O75129 1339 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-210ENST00000442216 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 MCAMP43121 646 aa18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 CRKP46108 304 aa18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 PRMT6Q96LA8 375 aaPredicted RBP18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
CSNK1E-210ENST00000442216 MYO5AQ9Y4I1 1855 aaKnown RBP18.42■□□□□ 0.54
CSNK1E-210ENST00000442216 ZDHHC15Q96MV8 337 aa18.42■□□□□ 0.54
CSNK1E-210ENST00000442216 APBB1O00213 710 aa18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 TRAF5O00463 557 aa18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 PRDX5P30044 214 aa18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 HDAC1Q13547 482 aaPredicted RBP18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 TLR7Q9NYK1 1049 aaKnown RBP18.41■□□□□ 0.54
CSNK1E-210ENST00000442216 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 DOCK2Q92608 1830 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 ERICH6Q7L0X2 663 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 SLF2Q8IX21 1173 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 ABCF2Q9UG63 623 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 PCDHAC2Q9Y5I4 1007 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
CSNK1E-210ENST00000442216 CELF2O95319 508 aaKnown RBP18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 TNFAIP1Q13829 316 aa18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 CST9Q5W186 159 aa18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.53
CSNK1E-210ENST00000442216 APOBEC3HQ6NTF7 200 aaKnown RBP18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 PI16Q6UXB8 463 aa18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 DZIP1Q86YF9 867 aaKnown RBP18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 CDCA5Q96FF9 252 aa18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 ZNF70Q9UC06 446 aaPredicted RBP18.38■□□□□ 0.53
CSNK1E-210ENST00000442216 FKBP1CQ5VVH2 108 aa18.37■□□□□ 0.53
CSNK1E-210ENST00000442216 TDRD3Q9H7E2 651 aaKnown RBP18.37■□□□□ 0.53
CSNK1E-210ENST00000442216 DAGLAQ9Y4D2 1042 aa18.37■□□□□ 0.53
CSNK1E-210ENST00000442216 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 GAKO14976 1311 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 CYP2E1P05181 493 aaPredicted RBP18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 GSTO1P78417 241 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 TMED8Q6PL24 325 aaPredicted RBP18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 DNAJC5GQ8N7S2 189 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 PAPPA2Q9BXP8 1791 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
CSNK1E-210ENST00000442216 AOX1Q06278 1338 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 RASSF10A6NK89 507 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 LDHCP07864 332 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 NF2P35240 595 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 ZAP70P43403 619 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 TNNI2P48788 182 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 FKBP1BP68106 108 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 HTRA3P83110 453 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 MECOMQ03112 1051 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 HHIPL1Q96JK4 782 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 ZNF408Q9H9D4 720 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 VEZTQ9HBM0 779 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 TMOD2Q9NZR1 351 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 LRP2BPQ9P2M1 347 aa18.35■□□□□ 0.53
CSNK1E-210ENST00000442216 MROH7-TTC4A0A0A0MT08 1334 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 ATP5JP18859 108 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 TTF1Q15361 905 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 DLK2Q6UY11 383 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 C2orf69Q8N8R5 385 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 KLRG1Q96E93 195 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 RAI14Q9P0K7 980 aa18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 ABT1Q9ULW3 272 aaKnown RBP18.34■□□□□ 0.53
CSNK1E-210ENST00000442216 MYH7P12883 1935 aa18.33■□□□□ 0.53
CSNK1E-210ENST00000442216 CNTNAP1P78357 1384 aa18.33■□□□□ 0.53
CSNK1E-210ENST00000442216 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 FAM83AQ86UY5 434 aa18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 AK9Q5TCS8 1911 aa18.33■□□□□ 0.52
CSNK1E-210ENST00000442216 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 RASA3Q14644 834 aa18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
CSNK1E-210ENST00000442216 CDC42EP5Q6NZY7 148 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms