RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 TNNI2P48788 182 aa17.99■□□□□ 0.47
PTPRN-206ENST00000442029 RASA3Q14644 834 aa17.99■□□□□ 0.47
PTPRN-206ENST00000442029 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
PTPRN-206ENST00000442029 INTS3Q68E01 1043 aaKnown RBP17.99■□□□□ 0.47
PTPRN-206ENST00000442029 DZIP1LQ8IYY4 767 aaKnown RBP17.99■□□□□ 0.47
PTPRN-206ENST00000442029 TDRD3Q9H7E2 651 aaKnown RBP17.99■□□□□ 0.47
PTPRN-206ENST00000442029 ZNF70Q9UC06 446 aaPredicted RBP17.99■□□□□ 0.47
PTPRN-206ENST00000442029 LAMB1P07942 1786 aa17.99■□□□□ 0.47
PTPRN-206ENST00000442029 IL15P40933 162 aaPredicted RBP17.98■□□□□ 0.47
PTPRN-206ENST00000442029 IREB2P48200 963 aaKnown RBP17.98■□□□□ 0.47
PTPRN-206ENST00000442029 SREBF2Q12772 1141 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 DGKZQ13574 1117 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 ATG9AQ7Z3C6 839 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 FZD1Q9UP38 647 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 MYH2Q9UKX2 1941 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 AOX1Q06278 1338 aa17.98■□□□□ 0.47
PTPRN-206ENST00000442029 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
PTPRN-206ENST00000442029 LDLRAD1Q5T700 205 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 NBPF12Q5TAG4 269 aaPredicted RBP17.97■□□□□ 0.47
PTPRN-206ENST00000442029 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 SLC10A4Q96EP9 437 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
PTPRN-206ENST00000442029 TMOD2Q9NZR1 351 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
PTPRN-206ENST00000442029 TCP10L2B9ZVM9 353 aa17.96■□□□□ 0.47
PTPRN-206ENST00000442029 BCAR3O75815 825 aa17.96■□□□□ 0.47
PTPRN-206ENST00000442029 MAP3K11Q16584 847 aa17.96■□□□□ 0.47
PTPRN-206ENST00000442029 WDR66Q8TBY9 1149 aa17.96■□□□□ 0.47
PTPRN-206ENST00000442029 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
PTPRN-206ENST00000442029 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
PTPRN-206ENST00000442029 CCDC85CA6NKD9 419 aa17.95■□□□□ 0.46
PTPRN-206ENST00000442029 SRGAP3O43295 1099 aa17.95■□□□□ 0.46
PTPRN-206ENST00000442029 TRIM27P14373 513 aa17.95■□□□□ 0.46
PTPRN-206ENST00000442029 GRIK5Q16478 980 aa17.95■□□□□ 0.46
PTPRN-206ENST00000442029 COPRSQ9NQ92 184 aa17.95■□□□□ 0.46
PTPRN-206ENST00000442029 UNCXA6NJT0 531 aa17.94■□□□□ 0.46
PTPRN-206ENST00000442029 TM4SF4P48230 202 aa17.94■□□□□ 0.46
PTPRN-206ENST00000442029 SPRYD7Q5W111 196 aa17.94■□□□□ 0.46
PTPRN-206ENST00000442029 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
PTPRN-206ENST00000442029 ZBTB48P10074 688 aaPredicted RBP17.93■□□□□ 0.46
PTPRN-206ENST00000442029 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
PTPRN-206ENST00000442029 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
PTPRN-206ENST00000442029 ZDHHC15Q96MV8 337 aa17.93■□□□□ 0.46
PTPRN-206ENST00000442029 MRIQ9BWK5 157 aa17.93■□□□□ 0.46
PTPRN-206ENST00000442029 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
PTPRN-206ENST00000442029 USP2O75604 605 aaPredicted RBP17.92■□□□□ 0.46
PTPRN-206ENST00000442029 GNAI2P04899 355 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 HHIPL2Q6UWX4 724 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 WNK4Q96J92 1243 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 TMEM39BQ9GZU3 492 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
PTPRN-206ENST00000442029 SEMA3EO15041 775 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 TBC1D8O95759 1140 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 ALDH1A1P00352 501 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 CACNB3P54284 484 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 INHBEP58166 350 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 AKAP2Q9Y2D5 859 aa17.91■□□□□ 0.46
PTPRN-206ENST00000442029 LDHBP07195 334 aaKnown RBP17.9■□□□□ 0.46
PTPRN-206ENST00000442029 PHKA1P46020 1223 aa17.9■□□□□ 0.46
PTPRN-206ENST00000442029 MTX1Q13505 466 aa17.9■□□□□ 0.46
PTPRN-206ENST00000442029 FTSJ3Q8IY81 847 aaKnown RBP17.9■□□□□ 0.46
PTPRN-206ENST00000442029 HOOK2Q96ED9 719 aa17.9■□□□□ 0.46
PTPRN-206ENST00000442029 TNNQ9UQP3 1299 aa17.9■□□□□ 0.46
PTPRN-206ENST00000442029 ZGPATQ8N5A5 531 aaKnown RBP17.89■□□□□ 0.45
PTPRN-206ENST00000442029 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.45
PTPRN-206ENST00000442029 TEPSINQ96N21 525 aa17.89■□□□□ 0.45
PTPRN-206ENST00000442029 CSADQ9Y600 493 aa17.89■□□□□ 0.45
PTPRN-206ENST00000442029 DOCK2Q92608 1830 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 PRDX5P30044 214 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 ADORA1P30542 326 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 TFCP2Q12800 502 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPRN-206ENST00000442029 FKBP1CQ5VVH2 108 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 OTUD7BQ6GQQ9 843 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
PTPRN-206ENST00000442029 CTU1Q7Z7A3 348 aaKnown RBP17.88■□□□□ 0.45
PTPRN-206ENST00000442029 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 ELP3Q9H9T3 547 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 SALL1Q9NSC2 1324 aa17.88■□□□□ 0.45
PTPRN-206ENST00000442029 A0A1B0GUL7 405 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 GPR25O00155 361 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 TIMM10P62072 90 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 MVPQ14764 893 aaKnown RBP17.87■□□□□ 0.45
PTPRN-206ENST00000442029 IFNL1Q8IU54 200 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 CDAN1Q8IWY9 1227 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 ZNF296Q8WUU4 475 aaPredicted RBP17.87■□□□□ 0.45
PTPRN-206ENST00000442029 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 ZBED9Q6R2W3 1325 aa17.87■□□□□ 0.45
PTPRN-206ENST00000442029 DIXDC1Q155Q3 683 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 NOM1Q5C9Z4 860 aaKnown RBP17.86■□□□□ 0.45
PTPRN-206ENST00000442029 GORABQ5T7V8 394 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 DCAF15Q66K64 600 aa17.86■□□□□ 0.45
PTPRN-206ENST00000442029 DZIP1Q86YF9 867 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms