RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 DZIP1LQ8IYY4 767 aaKnown RBP23.54■■□□□ 1.36
HMGB3P22-201ENST00000442010 TSKSQ9UJT2 592 aa23.54■■□□□ 1.36
HMGB3P22-201ENST00000442010 LAMB1P07942 1786 aa23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 ZBTB22O15209 634 aa23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 GNAI2P04899 355 aa23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 MRIQ9BWK5 157 aa23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 ZNF70Q9UC06 446 aaPredicted RBP23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 SUGT1Q9Y2Z0 365 aa23.53■■□□□ 1.36
HMGB3P22-201ENST00000442010 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
HMGB3P22-201ENST00000442010 LDLRAD1Q5T700 205 aa23.52■■□□□ 1.36
HMGB3P22-201ENST00000442010 CSRNP1Q96S65 589 aa23.52■■□□□ 1.36
HMGB3P22-201ENST00000442010 TDRD3Q9H7E2 651 aaKnown RBP23.52■■□□□ 1.36
HMGB3P22-201ENST00000442010 VEZTQ9HBM0 779 aa23.52■■□□□ 1.36
HMGB3P22-201ENST00000442010 PNMA6EA0A0J9YXQ4 647 aa23.51■■□□□ 1.35
HMGB3P22-201ENST00000442010 TTLL12Q14166 644 aaPredicted RBP23.51■■□□□ 1.35
HMGB3P22-201ENST00000442010 ARMC9Q7Z3E5 817 aa23.51■■□□□ 1.35
HMGB3P22-201ENST00000442010 FZD1Q9UP38 647 aa23.51■■□□□ 1.35
HMGB3P22-201ENST00000442010 OTOFQ9HC10 1997 aa23.51■■□□□ 1.35
HMGB3P22-201ENST00000442010 RLBP1P12271 317 aa23.5■■□□□ 1.35
HMGB3P22-201ENST00000442010 PRKG1Q13976 671 aa23.5■■□□□ 1.35
HMGB3P22-201ENST00000442010 RASA3Q14644 834 aa23.5■■□□□ 1.35
HMGB3P22-201ENST00000442010 WDR66Q8TBY9 1149 aa23.5■■□□□ 1.35
HMGB3P22-201ENST00000442010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.5■■□□□ 1.35
HMGB3P22-201ENST00000442010 ADORA1P30542 326 aa23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 PHKA1P46020 1223 aa23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 NBPF12Q5TAG4 269 aaPredicted RBP23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 ZDHHC15Q96MV8 337 aa23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 SAGE1Q9NXZ1 904 aa23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 ANGEL1Q9UNK9 670 aaKnown RBP23.49■■□□□ 1.35
HMGB3P22-201ENST00000442010 TNFAIP1Q13829 316 aa23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 HHIPL2Q6UWX4 724 aa23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 REM2Q8IYK8 340 aaPredicted RBP23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 TEKT1Q969V4 418 aa23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 TEPSINQ96N21 525 aa23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 MYH2Q9UKX2 1941 aa23.48■■□□□ 1.35
HMGB3P22-201ENST00000442010 TIMM10P62072 90 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 TFCP2Q12800 502 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 SUPT20HL1Q3ZLR7 823 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 APOBEC3HQ6NTF7 200 aaKnown RBP23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 RNF186Q9NXI6 227 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 MAST3O60307 1309 aa23.47■■□□□ 1.35
HMGB3P22-201ENST00000442010 SEMA3EO15041 775 aa23.46■■□□□ 1.35
HMGB3P22-201ENST00000442010 ZBTB7BO15156 539 aaPredicted RBP23.46■■□□□ 1.35
HMGB3P22-201ENST00000442010 POLA2Q14181 598 aa23.46■■□□□ 1.35
HMGB3P22-201ENST00000442010 SALL1Q9NSC2 1324 aa23.46■■□□□ 1.35
HMGB3P22-201ENST00000442010 GNL3LQ9NVN8 582 aaKnown RBP23.46■■□□□ 1.35
HMGB3P22-201ENST00000442010 A0A1B0GUL7 405 aa23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 PPP1R12BO60237 982 aaPredicted RBP23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 USP2O75604 605 aaPredicted RBP23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 CDAN1Q8IWY9 1227 aa23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 FTSJ3Q8IY81 847 aaKnown RBP23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 DENND2AQ9ULE3 1009 aa23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
HMGB3P22-201ENST00000442010 UNCXA6NJT0 531 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 TCP10L2B9ZVM9 353 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 PRDX5P30044 214 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 ATP8B2P98198 1209 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 SSH3Q8TE77 659 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 XAGE2Q96GT9 111 aa23.44■■□□□ 1.34
HMGB3P22-201ENST00000442010 TRPA1O75762 1119 aa23.43■■□□□ 1.34
HMGB3P22-201ENST00000442010 TM4SF4P48230 202 aa23.43■■□□□ 1.34
HMGB3P22-201ENST00000442010 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
HMGB3P22-201ENST00000442010 TMEM39BQ9GZU3 492 aa23.43■■□□□ 1.34
HMGB3P22-201ENST00000442010 PDS5AQ29RF7 1337 aaKnown RBP23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 CACNB3P54284 484 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 FKBP1CQ5VVH2 108 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 SPRYD7Q5W111 196 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 CLMNQ96JQ2 1002 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 C1orf115Q9H7X2 142 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 DAGLAQ9Y4D2 1042 aa23.42■■□□□ 1.34
HMGB3P22-201ENST00000442010 TNNI2P48788 182 aa23.41■■□□□ 1.34
HMGB3P22-201ENST00000442010 DIXDC1Q155Q3 683 aa23.41■■□□□ 1.34
HMGB3P22-201ENST00000442010 AK9Q5TCS8 1911 aa23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 IREB2P48200 963 aaKnown RBP23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 MKRN3Q13064 507 aaKnown RBP23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 G3BP1Q13283 466 aaKnown RBP eCLIP23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 FAM83AQ86UY5 434 aa23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 SLC10A4Q96EP9 437 aa23.4■■□□□ 1.34
HMGB3P22-201ENST00000442010 CAPN15O75808 1086 aa23.39■■□□□ 1.33
HMGB3P22-201ENST00000442010 LDHBP07195 334 aaKnown RBP23.39■■□□□ 1.33
HMGB3P22-201ENST00000442010 MVPQ14764 893 aaKnown RBP23.39■■□□□ 1.33
HMGB3P22-201ENST00000442010 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
HMGB3P22-201ENST00000442010 ZBTB48P10074 688 aaPredicted RBP23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 ANKRD13AQ8IZ07 590 aa23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 WNK4Q96J92 1243 aa23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 TMOD2Q9NZR1 351 aa23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
HMGB3P22-201ENST00000442010 CDC42EP5Q6NZY7 148 aa23.37■■□□□ 1.33
HMGB3P22-201ENST00000442010 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
HMGB3P22-201ENST00000442010 NOP58Q9Y2X3 529 aaKnown RBP23.37■■□□□ 1.33
HMGB3P22-201ENST00000442010 ARID4AP29374 1257 aaPredicted RBP23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 GJA5P36382 358 aa23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 SREBF2Q12772 1141 aa23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 ABHD8Q96I13 439 aa23.36■■□□□ 1.33
HMGB3P22-201ENST00000442010 GPR108Q9NPR9 543 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms