RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ABI1Q8IZP0 508 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 ABTB2Q8N961 1025 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 PIM2Q9P1W9 311 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 CADPSQ9ULU8 1353 aa6.29□□□□□ -1.4
HMGB3P9-201ENST00000441799 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 SOX1O00570 391 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 ATG7O95352 703 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 DLGAP3O95886 979 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 MFAP1P55081 439 aaKnown RBP6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 CABP4P57796 275 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 FZD5Q13467 585 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 MSMPQ1L6U9 139 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 TMCO4Q5TGY1 634 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 ZNF622Q969S3 477 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 TRAIPQ9BWF2 469 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 CHRDQ9H2X0 955 aa6.28□□□□□ -1.4
HMGB3P9-201ENST00000441799 MYO15BQ96JP2 1530 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 PLEKHD1A6NEE1 506 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 A6NHS1 94 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 TIAF1O95411 115 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 CES1P23141 567 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 CANXP27824 592 aaKnown RBP6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 MMP14P50281 582 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 FDX2Q6P4F2 183 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 VN1R5Q7Z5H4 357 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 EDEM1Q92611 657 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 NXPE3Q969Y0 559 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
HMGB3P9-201ENST00000441799 LOC102724159A0A0B4J2E5 919 aa6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 FAM177BA6PVY3 158 aa6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 COL19A1Q14993 1142 aa6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 PWP2Q15269 919 aaKnown RBP6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 FBXL6Q8N531 539 aa6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 TMEM102Q8N9M5 508 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 SMG8Q8ND04 991 aaKnown RBP6.26□□□□□ -1.41
HMGB3P9-201ENST00000441799 FOSL1P15407 271 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 CBLL1Q75N03 491 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 C12orf50Q8NA57 414 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 ATG3Q9NT62 314 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 LEMD3Q9Y2U8 911 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 ERCC6Q03468 1493 aa6.25□□□□□ -1.41
HMGB3P9-201ENST00000441799 LOC100289279A0A1B0GTE1 492 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 GAS2O43903 313 aaKnown RBP6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 PRNPP04156 253 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 DRD2P14416 443 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 ADMP35318 185 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 DNM1Q05193 864 aaKnown RBP6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 OS9Q13438 667 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 NUTM2GQ5VZR2 741 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 TMTC2Q8N394 836 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 OSMRQ99650 979 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 RIPOR2Q9Y4F9 1068 aa6.24□□□□□ -1.41
HMGB3P9-201ENST00000441799 ARID1BQ8NFD5 2236 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 FAM95CA0A1B0GW59 222 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 PDGFAP04085 211 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 RPLP1P05386 114 aaKnown RBP6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 ARL4DP49703 201 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 IKBKEQ14164 716 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 AXDND1Q5T1B0 1012 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 BSNDQ8WZ55 320 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 ZKSCAN3Q9BRR0 538 aa6.23□□□□□ -1.41
HMGB3P9-201ENST00000441799 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 EREGO14944 169 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 RXRBP28702 533 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 OGFOD2Q6N063 350 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 GATA6Q92908 595 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 USP26Q9BXU7 913 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 OSBPL1AQ9BXW6 950 aa6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 LAS1LQ9Y4W2 734 aaKnown RBP6.22□□□□□ -1.41
HMGB3P9-201ENST00000441799 NFKBIBQ15653 356 aa6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 EXOSC6Q5RKV6 272 aaKnown RBP6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 C2CD4AQ8NCU7 369 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 GIMAP7Q8NHV1 300 aa6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 HELQQ8TDG4 1101 aa6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 PMEPA1Q969W9 287 aa6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 SOX17Q9H6I2 414 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P9-201ENST00000441799 ESRRAP11474 423 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 MZF1P28698 734 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 EIF1AXP47813 144 aaKnown RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 JAG1P78504 1218 aa6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 NOM1Q5C9Z4 860 aaKnown RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 SPTY2D1Q68D10 685 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 PAOXQ6QHF9 649 aa6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 CYP4F12Q9HCS2 524 aa6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
HMGB3P9-201ENST00000441799 ANGEL1Q9UNK9 670 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms