RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 COL9A3Q14050 684 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-206ENST00000441580 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
CPSF4-206ENST00000441580 FOXD4L5Q5VV16 416 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-206ENST00000441580 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
CPSF4-206ENST00000441580 FOXD4L4Q8WXT5 416 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-206ENST00000441580 CNNM2Q9H8M5 875 aa15.54■□□□□ 0.08
CPSF4-206ENST00000441580 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
CPSF4-206ENST00000441580 VPS37CA5D8V6 355 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-206ENST00000441580 GOLGA6L3A6NEY3 463 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 PATL2C9JE40 543 aaKnown RBP15.53■□□□□ 0.08
CPSF4-206ENST00000441580 PLSCR1O15162 318 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 PRC1O43663 620 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 APPP05067 770 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
CPSF4-206ENST00000441580 TM4SF1P30408 202 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 HAND2P61296 217 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-206ENST00000441580 LTBP1Q14766 1721 aa15.53■□□□□ 0.08
CPSF4-206ENST00000441580 QSER1Q2KHR3 1735 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 DHX16O60231 1041 aaKnown RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 SERPINB2P05120 415 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 SCRN1Q12765 414 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 STK3Q13188 491 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 C15orf52Q6ZUT6 534 aaKnown RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 TBC1D10CQ8IV04 446 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 SMARCC2Q8TAQ2 1214 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 SYAP1Q96A49 352 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 EPB41L4AQ9HCS5 686 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-206ENST00000441580 RAI14Q9P0K7 980 aa15.52■□□□□ 0.08
CPSF4-206ENST00000441580 MYH15Q9Y2K3 1946 aa15.52■□□□□ 0.07
CPSF4-206ENST00000441580 SALL1Q9NSC2 1324 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 IRS2Q9Y4H2 1338 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 ANKRD31Q8N7Z5 1873 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 A0A0G2JLW4 131 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 PRPF40AO75400 957 aaKnown RBP15.51■□□□□ 0.07
CPSF4-206ENST00000441580 CYP7A1P22680 504 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 TDO2P48775 406 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 APOBRQ0VD83 1088 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 LCORLQ8N3X6 602 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 FAM184AQ8NB25 1140 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 TMEM87BQ96K49 555 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 MTA3Q9BTC8 594 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 LRRC2Q9BYS8 371 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 RNF41Q9H4P4 317 aaPredicted RBP15.51■□□□□ 0.07
CPSF4-206ENST00000441580 ARMT1Q9H993 441 aa15.51■□□□□ 0.07
CPSF4-206ENST00000441580 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 PTPDC1A2A3K4 754 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
CPSF4-206ENST00000441580 SPTY2D1Q68D10 685 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-206ENST00000441580 NAA16Q6N069 864 aaPredicted RBP15.5■□□□□ 0.07
CPSF4-206ENST00000441580 ZNF804AQ7Z570 1209 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 NSUN7Q8NE18 718 aaKnown RBP15.5■□□□□ 0.07
CPSF4-206ENST00000441580 KRT23Q9C075 422 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 NBPF3Q9H094 633 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 ABCF2Q9UG63 623 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 SLC4A4Q9Y6R1 1079 aa15.5■□□□□ 0.07
CPSF4-206ENST00000441580 NID2Q14112 1375 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 GOLGA8BA8MQT2 603 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 HOXA10P31260 410 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-206ENST00000441580 ANTXR2P58335 489 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 DDR1Q08345 913 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 GIMAP6Q6P9H5 292 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 RGS22Q8NE09 1264 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 STAG1Q8WVM7 1258 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 ANKIB1Q9P2G1 1089 aa15.49■□□□□ 0.07
CPSF4-206ENST00000441580 ANGEL1Q9UNK9 670 aaKnown RBP15.49■□□□□ 0.07
CPSF4-206ENST00000441580 IQSEC3Q9UPP2 1182 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-206ENST00000441580 NEDD4P46934 1319 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 GSG1L2A8MUP6 293 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 SH2B2O14492 632 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-206ENST00000441580 PCP11498 1178 aaKnown RBP15.48■□□□□ 0.07
CPSF4-206ENST00000441580 ATP2B4P23634 1241 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 KLRK1P26718 216 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 RXRBP28702 533 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 PDIA3P30101 505 aaKnown RBP15.48■□□□□ 0.07
CPSF4-206ENST00000441580 ZNF445P59923 1031 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 KRT85P78386 507 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 CAVIN1Q6NZI2 390 aaKnown RBP15.48■□□□□ 0.07
CPSF4-206ENST00000441580 CDC37L1Q7L3B6 337 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 CRAMP1Q96RY5 1269 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 BRIP1Q9BX63 1249 aa15.48■□□□□ 0.07
CPSF4-206ENST00000441580 COL11A2P13942 1736 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-206ENST00000441580 KLF18A0A0U1RQI7 1052 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 KLRG2A4D1S0 409 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-206ENST00000441580 H3BQV1 296 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 JAK2O60674 1132 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 CDKL5O76039 1030 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 NT5C2P49902 561 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 MRE11P49959 708 aa15.47■□□□□ 0.07
CPSF4-206ENST00000441580 UBE2HP62256 183 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms