RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 TIMM10P62072 90 aa16.77■□□□□ 0.28
RFTN1-204ENST00000441460 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
RFTN1-204ENST00000441460 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
RFTN1-204ENST00000441460 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
RFTN1-204ENST00000441460 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
RFTN1-204ENST00000441460 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
RFTN1-204ENST00000441460 ZNF70Q9UC06 446 aaPredicted RBP16.77■□□□□ 0.28
RFTN1-204ENST00000441460 PRKG1Q13976 671 aa16.76■□□□□ 0.27
RFTN1-204ENST00000441460 POLA2Q14181 598 aa16.76■□□□□ 0.27
RFTN1-204ENST00000441460 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
RFTN1-204ENST00000441460 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
RFTN1-204ENST00000441460 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
RFTN1-204ENST00000441460 A0A1B0GUL7 405 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 NF2P35240 595 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 HDLBPQ00341 1268 aaKnown RBP16.75■□□□□ 0.27
RFTN1-204ENST00000441460 KIF23Q02241 960 aaPredicted RBP16.75■□□□□ 0.27
RFTN1-204ENST00000441460 TTLL12Q14166 644 aaPredicted RBP16.75■□□□□ 0.27
RFTN1-204ENST00000441460 RASA3Q14644 834 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 PPP2R3BQ9Y5P8 575 aa16.75■□□□□ 0.27
RFTN1-204ENST00000441460 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 NBPF12Q5TAG4 269 aaPredicted RBP16.74■□□□□ 0.27
RFTN1-204ENST00000441460 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
RFTN1-204ENST00000441460 WDR66Q8TBY9 1149 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 MRIQ9BWK5 157 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 MYH13Q9UKX3 1938 aa16.74■□□□□ 0.27
RFTN1-204ENST00000441460 ZBTB22O15209 634 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 PRDX5P30044 214 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 LDLRAD1Q5T700 205 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 TNS4Q8IZW8 715 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 ZDHHC15Q96MV8 337 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 CSRNP1Q96S65 589 aa16.73■□□□□ 0.27
RFTN1-204ENST00000441460 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
RFTN1-204ENST00000441460 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
RFTN1-204ENST00000441460 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 TCP10L2B9ZVM9 353 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 CACNB3P54284 484 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 G3BP1Q13283 466 aaKnown RBP eCLIP16.72■□□□□ 0.27
RFTN1-204ENST00000441460 RASGRF1Q13972 1273 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 HHIPL2Q6UWX4 724 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 ARMC9Q7Z3E5 817 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 DENND2AQ9ULE3 1009 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
RFTN1-204ENST00000441460 MAST3O60307 1309 aa16.71■□□□□ 0.27
RFTN1-204ENST00000441460 SEMA3EO15041 775 aa16.71■□□□□ 0.27
RFTN1-204ENST00000441460 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
RFTN1-204ENST00000441460 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
RFTN1-204ENST00000441460 CA12O43570 354 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 SUPT20HL1Q3ZLR7 823 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 DAGLAQ9Y4D2 1042 aa16.7■□□□□ 0.26
RFTN1-204ENST00000441460 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 LDHBP07195 334 aaKnown RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 MVPQ14764 893 aaKnown RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
RFTN1-204ENST00000441460 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
RFTN1-204ENST00000441460 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
RFTN1-204ENST00000441460 PI16Q6UXB8 463 aa16.68■□□□□ 0.26
RFTN1-204ENST00000441460 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
RFTN1-204ENST00000441460 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
RFTN1-204ENST00000441460 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
RFTN1-204ENST00000441460 TRPA1O75762 1119 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
RFTN1-204ENST00000441460 TNNI2P48788 182 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
RFTN1-204ENST00000441460 MCAMP43121 646 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 NFIAQ12857 509 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 TNNI3KQ59H18 835 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 SPRYD7Q5W111 196 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 ABCF2Q9UG63 623 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 FPGT-TNNI3KV9GXZ4 949 aa16.66■□□□□ 0.26
RFTN1-204ENST00000441460 MS4A1P11836 297 aa16.65■□□□□ 0.26
RFTN1-204ENST00000441460 GJA5P36382 358 aa16.65■□□□□ 0.26
RFTN1-204ENST00000441460 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
RFTN1-204ENST00000441460 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
RFTN1-204ENST00000441460 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
RFTN1-204ENST00000441460 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
RFTN1-204ENST00000441460 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
RFTN1-204ENST00000441460 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
RFTN1-204ENST00000441460 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms