RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FECHP22830 423 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-206ENST00000441438 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-206ENST00000441438 TNRQ92752 1358 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 HSPA2P54652 639 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 INF2Q27J81 1249 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 TGIF2Q9GZN2 237 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
SYNE2-206ENST00000441438 TFIP11Q9UBB9 837 aaKnown RBP12.3□□□□□ -0.44
SYNE2-206ENST00000441438 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-206ENST00000441438 SFSWAPQ12872 951 aaKnown RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 BIRC3Q13489 604 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 N4BP2L2Q92802 583 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 LTBP4Q8N2S1 1624 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 GYS1P13807 737 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 OSBPL5Q9H0X9 879 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 HNRNPCP07910 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
SYNE2-206ENST00000441438 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
SYNE2-206ENST00000441438 INMTO95050 263 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 MYCLP1P12525 358 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 VCAM1P19320 739 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 NUCB1Q02818 461 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 SKA1Q96BD8 255 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 TSPY26PQ9H489 355 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 FAM25EA8MYX2 175 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 SLC7A5P2Q9GIP4 190 aa12.28□□□□□ -0.44
SYNE2-206ENST00000441438 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-206ENST00000441438 H0YHG0 523 aa12.27□□□□□ -0.44
SYNE2-206ENST00000441438 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.44
SYNE2-206ENST00000441438 EIF2B5Q13144 721 aaKnown RBP12.27□□□□□ -0.44
SYNE2-206ENST00000441438 PLEKHG4Q58EX7 1191 aa12.27□□□□□ -0.44
SYNE2-206ENST00000441438 MRS2Q9HD23 443 aa12.27□□□□□ -0.44
SYNE2-206ENST00000441438 NGRNQ9NPE2 291 aaKnown RBP12.27□□□□□ -0.44
SYNE2-206ENST00000441438 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.44
SYNE2-206ENST00000441438 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 FAM83BQ5T0W9 1011 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
SYNE2-206ENST00000441438 FAM184AQ8NB25 1140 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 FAM167BQ9BTA0 163 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 C12orf49Q9H741 205 aa12.27□□□□□ -0.45
SYNE2-206ENST00000441438 ELL2O00472 640 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 CDKN1CP49918 316 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 CDCA2Q69YH5 1023 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 SYNE3Q6ZMZ3 975 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 FANCCQ00597 558 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 ALFQ53S48 1182 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 PPHLN1Q8NEY8 458 aaKnown RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 TRIM11Q96F44 468 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 UROC1Q96N76 676 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 KANSL2Q9H9L4 492 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 UBA7P41226 1012 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 FAM133BQ5BKY9 247 aaKnown RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 WDR45BQ5MNZ6 344 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 FAM161BQ96MY7 647 aa12.26□□□□□ -0.45
SYNE2-206ENST00000441438 C9orf78Q9NZ63 289 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-206ENST00000441438 TECPR2O15040 1411 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 K7ELQ4 463 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 PIP5K1CO60331 668 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 UBXN2AP68543 259 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 FAM126AQ9BYI3 521 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 DIAPH3Q9NSV4 1193 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 MRGBPQ9NV56 204 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 IRAK4Q9NWZ3 460 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 DAAM1Q9Y4D1 1078 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 SPATA31E1Q6ZUB1 1445 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 TCEA3O75764 348 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 UBASH3AP57075 661 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 NSUN2Q08J23 767 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 BRDTQ58F21 947 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-206ENST00000441438 HYIQ5T013 277 aa12.25□□□□□ -0.45
SYNE2-206ENST00000441438 GGT6Q6P531 493 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms