RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 YDJCA8MPS7 323 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 IGSF3O75054 1194 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 PRDX5P30044 214 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 MCMDC2Q4G0Z9 681 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 APPBP2Q92624 585 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 OSBP2Q969R2 916 aa12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
AP004290.1-201ENST00000440915 USP17L3A6NCW0 530 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 USP17L4A6NCW7 530 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 LDHBP07195 334 aaKnown RBP12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 PRELPP51888 382 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 MECOMQ03112 1051 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 GRIK5Q16478 980 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 USP17L1Q7RTZ2 530 aa12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
AP004290.1-201ENST00000440915 M0R2C6 588 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 REC8O95072 547 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 CYP7A1P22680 504 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 DACT2Q5SW24 774 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 ZNF589Q86UQ0 364 aaPredicted RBP12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 NIM1KQ8IY84 436 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 MXD3Q9BW11 206 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 PUS7LQ9H0K6 701 aaKnown RBP12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 MAST3O60307 1309 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 MAST2Q6P0Q8 1798 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
AP004290.1-201ENST00000440915 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 SUGT1Q9Y2Z0 365 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 GSTO1P78417 241 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 ADGRA1Q86SQ6 560 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
AP004290.1-201ENST00000440915 PSME4Q14997 1843 aa12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 CCDC88AQ3V6T2 1871 aa12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 GPAA1O43292 621 aa12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 RAD17O75943 681 aa12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 VIL1P09327 827 aaKnown RBP12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 PTH1RQ03431 593 aa12.36□□□□□ -0.43
AP004290.1-201ENST00000440915 MAGEB6P1A0A0J9YX57 407 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 PSMD14O00487 310 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 MBD4O95243 580 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 LDHCP07864 332 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 LMNB1P20700 586 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 CXCL9Q07325 125 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 GPR162Q16538 588 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 RSBN1LQ6PCB5 846 aaPredicted RBP12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 AIDAQ96BJ3 306 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 C22orf23Q9BZE7 217 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
AP004290.1-201ENST00000440915 FZD9O00144 591 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 DYNLL1P63167 89 aaKnown RBP12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
AP004290.1-201ENST00000440915 HSPD1P10809 573 aaKnown RBP12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 TNIP1Q15025 636 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 KIAA0825Q8IV33 1275 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 TBC1D32Q96NH3 1257 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 GMLQ99445 158 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 DSCC1Q9BVC3 393 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 GAKO14976 1311 aa12.33□□□□□ -0.44
AP004290.1-201ENST00000440915 GPR75-ASB3A0A0A6YYF3 556 aa12.32□□□□□ -0.44
AP004290.1-201ENST00000440915 FOXP2O15409 715 aa12.32□□□□□ -0.44
AP004290.1-201ENST00000440915 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
AP004290.1-201ENST00000440915 SBF1O95248 1867 aa12.32□□□□□ -0.44
AP004290.1-201ENST00000440915 BTDP43251 543 aa12.32□□□□□ -0.44
AP004290.1-201ENST00000440915 RBM25P49756 843 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms