RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CCDC158Q5M9N0 1113 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 RUFY3Q7L099 469 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
HDAC6-209ENST00000440653 FAM227BQ96M60 508 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
HDAC6-209ENST00000440653 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 BRIP1Q9BX63 1249 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 GLIS2Q9BZE0 524 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-209ENST00000440653 PDRG1Q9NUG6 133 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 SAGE1Q9NXZ1 904 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF652Q9Y2D9 606 aa10.88□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF330Q9Y3S2 320 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-209ENST00000440653 ANKRD18BA2A2Z9 1011 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 FAM155AB1AL88 458 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 SLC27A2O14975 620 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 PDE8AO60658 829 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 HMGB1P09429 215 aaKnown RBP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 KIF23Q02241 960 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 FKBP4Q02790 459 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 PTH1RQ03431 593 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 CSPP1Q1MSJ5 1256 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 CHMP4CQ96CF2 233 aa10.87□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-209ENST00000440653 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 TAF5LO75529 589 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 IFIT1P09914 478 aaKnown RBP10.86□□□□□ -0.67
HDAC6-209ENST00000440653 PDCP20941 246 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-209ENST00000440653 MRE11P49959 708 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
HDAC6-209ENST00000440653 TTC39AQ5SRH9 613 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 SOGA3Q5TF21 947 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF34Q8IZ26 560 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 DUOX1Q9NRD9 1551 aa10.86□□□□□ -0.67
HDAC6-209ENST00000440653 MROH5Q6ZUA9 1318 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 IRS4O14654 1257 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 SRGNP10124 158 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 RPS6KB1P23443 525 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 TTF1Q15361 905 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 ATP2B3Q16720 1220 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 ZMYM1Q5SVZ6 1142 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 GORABQ5T7V8 394 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 STYK1Q6J9G0 422 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 ZSCAN25Q6NSZ9 544 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 USP50Q70EL3 339 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 TMEM87AQ8NBN3 555 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.674e-9■■■■□ 24.5
HDAC6-209ENST00000440653 TRMT112Q9UI30 125 aaKnown RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 DDX49Q9Y6V7 483 aaKnown RBP10.85□□□□□ -0.67
HDAC6-209ENST00000440653 COL4A5P29400 1685 aa10.85□□□□□ -0.67
HDAC6-209ENST00000440653 UBN2Q6ZU65 1347 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 BRCA2P51587 3418 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 GOLIM4O00461 696 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
HDAC6-209ENST00000440653 ITGA6P23229 1130 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 IARSP41252 1262 aaKnown RBP10.84□□□□□ -0.67
HDAC6-209ENST00000440653 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-209ENST00000440653 HUNKP57058 714 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 LRRC24Q50LG9 513 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 METTL24Q5JXM2 366 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 MCTP1Q6DN14 999 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 DDX46Q7L014 1031 aaKnown RBP10.84□□□□□ -0.67
HDAC6-209ENST00000440653 TTLL11Q8NHH1 800 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 FAM89AQ96GI7 184 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 CENPFP49454 3210 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 MAST3O60307 1309 aa10.84□□□□□ -0.67
HDAC6-209ENST00000440653 UQCRFS1P1P0C7P4 283 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 PUM3Q15397 648 aaKnown RBP10.83□□□□□ -0.68
HDAC6-209ENST00000440653 PKN2Q16513 984 aaKnown RBP10.83□□□□□ -0.68
HDAC6-209ENST00000440653 NOL8Q76FK4 1167 aaKnown RBP10.83□□□□□ -0.68
HDAC6-209ENST00000440653 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 MASTLQ96GX5 879 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 CSRNP1Q96S65 589 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 CNNM1Q9NRU3 951 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 LMBRD1Q9NUN5 540 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 CTNNA3Q9UI47 895 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 ZDHHC9Q9Y397 364 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 KIF3AQ9Y496 699 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 ZMYM6O95789 1325 aa10.83□□□□□ -0.68
HDAC6-209ENST00000440653 STX6O43752 255 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 ZSCAN22P10073 491 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-209ENST00000440653 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
HDAC6-209ENST00000440653 GPTP24298 496 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 ZNF445P59923 1031 aa10.82□□□□□ -0.68
HDAC6-209ENST00000440653 PKP1Q13835 747 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms