RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
SP4-203ENST00000440636 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
SP4-203ENST00000440636 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
SP4-203ENST00000440636 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
SP4-203ENST00000440636 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
SP4-203ENST00000440636 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
SP4-203ENST00000440636 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
SP4-203ENST00000440636 C9orf78Q9NZ63 289 aaPredicted RBP16.54■□□□□ 0.24
SP4-203ENST00000440636 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
SP4-203ENST00000440636 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 CRKP46108 304 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 VGLL4Q14135 290 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 KAZALD1Q96I82 304 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
SP4-203ENST00000440636 CEP290O15078 2479 aa16.52■□□□□ 0.24
SP4-203ENST00000440636 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
SP4-203ENST00000440636 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
SP4-203ENST00000440636 GRIK5Q16478 980 aa16.52■□□□□ 0.24
SP4-203ENST00000440636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.24
SP4-203ENST00000440636 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
SP4-203ENST00000440636 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
SP4-203ENST00000440636 CCL15-CCL14A0A0B4J2E2 113 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 TNNI2P48788 182 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 GTF2A2P52657 109 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
SP4-203ENST00000440636 CCL15Q16663 113 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
SP4-203ENST00000440636 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
SP4-203ENST00000440636 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
SP4-203ENST00000440636 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
SP4-203ENST00000440636 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
SP4-203ENST00000440636 CSADQ9Y600 493 aa16.5■□□□□ 0.23
SP4-203ENST00000440636 UTYO14607 1347 aa16.49■□□□□ 0.23
SP4-203ENST00000440636 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
SP4-203ENST00000440636 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
SP4-203ENST00000440636 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
SP4-203ENST00000440636 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
SP4-203ENST00000440636 SPDYE5A6NIY4 337 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 CACNB3P54284 484 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
SP4-203ENST00000440636 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
SP4-203ENST00000440636 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
SP4-203ENST00000440636 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
SP4-203ENST00000440636 TEKT1Q969V4 418 aa16.47■□□□□ 0.23
SP4-203ENST00000440636 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
SP4-203ENST00000440636 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 APOBEC3HQ6NTF7 200 aaKnown RBP16.46■□□□□ 0.23
SP4-203ENST00000440636 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 FAM83AQ86UY5 434 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 ANKRD44Q8N8A2 993 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 MRIQ9BWK5 157 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 SZT2Q5T011 3432 aa16.46■□□□□ 0.23
SP4-203ENST00000440636 ZSWIM8A7E2V4 1837 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 IRF6O14896 467 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 TLR2O60603 784 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 PDE8BO95263 885 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 CETPP11597 493 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 ZKSCAN4Q969J2 545 aaPredicted RBP16.45■□□□□ 0.22
SP4-203ENST00000440636 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
SP4-203ENST00000440636 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
SP4-203ENST00000440636 RANBP2P49792 3224 aaKnown RBP16.45■□□□□ 0.22
SP4-203ENST00000440636 TRIOBPQ9H2D6 2365 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
SP4-203ENST00000440636 BCAMP50895 628 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
SP4-203ENST00000440636 PPIL2Q13356 520 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
SP4-203ENST00000440636 RPAP1Q9BWH6 1393 aaPredicted RBP16.43■□□□□ 0.22
SP4-203ENST00000440636 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
SP4-203ENST00000440636 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
SP4-203ENST00000440636 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
SP4-203ENST00000440636 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
SP4-203ENST00000440636 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
SP4-203ENST00000440636 FGFR2P21802 821 aa16.42■□□□□ 0.22
SP4-203ENST00000440636 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
SP4-203ENST00000440636 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
SP4-203ENST00000440636 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
SP4-203ENST00000440636 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
SP4-203ENST00000440636 MAST3O60307 1309 aa16.42■□□□□ 0.22
SP4-203ENST00000440636 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
SP4-203ENST00000440636 GNRH1P01148 92 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms