RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 LPIN2Q92539 896 aa21■□□□□ 0.95
COL16A1-204ENST00000440437 PPP1R12BO60237 982 aaPredicted RBP20.99■□□□□ 0.95
COL16A1-204ENST00000440437 FRAT2O75474 233 aaPredicted RBP20.99■□□□□ 0.95
COL16A1-204ENST00000440437 SLC5A1P13866 664 aa20.99■□□□□ 0.95
COL16A1-204ENST00000440437 MKRN3Q13064 507 aaKnown RBP20.99■□□□□ 0.95
COL16A1-204ENST00000440437 TNFAIP1Q13829 316 aa20.99■□□□□ 0.95
COL16A1-204ENST00000440437 SUPT20HL1Q3ZLR7 823 aa20.99■□□□□ 0.95
COL16A1-204ENST00000440437 SPRYD7Q5W111 196 aa20.99■□□□□ 0.95
COL16A1-204ENST00000440437 SIL1Q9H173 461 aa20.99■□□□□ 0.95
COL16A1-204ENST00000440437 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
COL16A1-204ENST00000440437 UNCXA6NJT0 531 aa20.97■□□□□ 0.95
COL16A1-204ENST00000440437 SREBF2Q12772 1141 aa20.97■□□□□ 0.95
COL16A1-204ENST00000440437 CLMNQ96JQ2 1002 aa20.97■□□□□ 0.95
COL16A1-204ENST00000440437 TEPSINQ96N21 525 aa20.97■□□□□ 0.95
COL16A1-204ENST00000440437 PA2G4Q9UQ80 394 aaKnown RBP20.97■□□□□ 0.95
COL16A1-204ENST00000440437 SUGT1Q9Y2Z0 365 aa20.97■□□□□ 0.95
COL16A1-204ENST00000440437 USP2O75604 605 aaPredicted RBP20.96■□□□□ 0.95
COL16A1-204ENST00000440437 TRIM27P14373 513 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 CDAN1Q8IWY9 1227 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 TEKT1Q969V4 418 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 MRIQ9BWK5 157 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 COPRSQ9NQ92 184 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 MAST3O60307 1309 aa20.96■□□□□ 0.95
COL16A1-204ENST00000440437 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 ZBTB48P10074 688 aaPredicted RBP20.95■□□□□ 0.94
COL16A1-204ENST00000440437 IL15P40933 162 aaPredicted RBP20.95■□□□□ 0.94
COL16A1-204ENST00000440437 ATP2B3Q16720 1220 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 WNK4Q96J92 1243 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 ZDHHC15Q96MV8 337 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 CFHR5Q9BXR6 569 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
COL16A1-204ENST00000440437 CCDC85CA6NKD9 419 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 BCAR3O75815 825 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 TBC1D8O95759 1140 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 GNAI3P08754 354 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 IREB2P48200 963 aaKnown RBP20.94■□□□□ 0.94
COL16A1-204ENST00000440437 MTX1Q13505 466 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 MIER1Q8N108 512 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 SLC10A4Q96EP9 437 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 TMEM39BQ9GZU3 492 aa20.94■□□□□ 0.94
COL16A1-204ENST00000440437 TNNI2P48788 182 aa20.93■□□□□ 0.94
COL16A1-204ENST00000440437 NOM1Q5C9Z4 860 aaKnown RBP20.93■□□□□ 0.94
COL16A1-204ENST00000440437 APOBEC3HQ6NTF7 200 aaKnown RBP20.93■□□□□ 0.94
COL16A1-204ENST00000440437 ATF7IPQ6VMQ6 1270 aa20.93■□□□□ 0.94
COL16A1-204ENST00000440437 ANKRD13AQ8IZ07 590 aa20.93■□□□□ 0.94
COL16A1-204ENST00000440437 WDR66Q8TBY9 1149 aa20.93■□□□□ 0.94
COL16A1-204ENST00000440437 MYH2Q9UKX2 1941 aa20.92■□□□□ 0.94
COL16A1-204ENST00000440437 MANSC4A6NHS7 340 aaPredicted RBP20.92■□□□□ 0.94
COL16A1-204ENST00000440437 ZBTB22O15209 634 aa20.92■□□□□ 0.94
COL16A1-204ENST00000440437 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
COL16A1-204ENST00000440437 GJA5P36382 358 aa20.92■□□□□ 0.94
COL16A1-204ENST00000440437 HHIPL2Q6UWX4 724 aa20.92■□□□□ 0.94
COL16A1-204ENST00000440437 CACNB3P54284 484 aa20.91■□□□□ 0.94
COL16A1-204ENST00000440437 CTU1Q7Z7A3 348 aaKnown RBP20.91■□□□□ 0.94
COL16A1-204ENST00000440437 ZNF296Q8WUU4 475 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-204ENST00000440437 RPAP1Q9BWH6 1393 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-204ENST00000440437 SALL1Q9NSC2 1324 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 GPR25O00155 361 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 PRDX5P30044 214 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 PHKA1P46020 1223 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 INHBEP58166 350 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL16A1-204ENST00000440437 FKBP1CQ5VVH2 108 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
COL16A1-204ENST00000440437 FAM83AQ86UY5 434 aa20.9■□□□□ 0.94
COL16A1-204ENST00000440437 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
COL16A1-204ENST00000440437 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.9■□□□□ 0.94
COL16A1-204ENST00000440437 SEMA3EO15041 775 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 ALDH1A1P00352 501 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 ADORA1P30542 326 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.89■□□□□ 0.93
COL16A1-204ENST00000440437 IFNL1Q8IU54 200 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 R3HDMLQ9H3Y0 253 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 TMOD2Q9NZR1 351 aa20.89■□□□□ 0.93
COL16A1-204ENST00000440437 IGF2BP3O00425 579 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL16A1-204ENST00000440437 RGS19P49795 217 aa20.88■□□□□ 0.93
COL16A1-204ENST00000440437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL16A1-204ENST00000440437 CLUAP1Q96AJ1 413 aa20.88■□□□□ 0.93
COL16A1-204ENST00000440437 GNL3LQ9NVN8 582 aaKnown RBP20.88■□□□□ 0.93
COL16A1-204ENST00000440437 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
COL16A1-204ENST00000440437 DAGLAQ9Y4D2 1042 aa20.88■□□□□ 0.93
COL16A1-204ENST00000440437 DOCK2Q92608 1830 aa20.88■□□□□ 0.93
COL16A1-204ENST00000440437 AK9Q5TCS8 1911 aa20.87■□□□□ 0.93
COL16A1-204ENST00000440437 CCDC102BQ68D86 513 aa20.87■□□□□ 0.93
COL16A1-204ENST00000440437 OPTNQ96CV9 577 aa20.87■□□□□ 0.93
COL16A1-204ENST00000440437 ELP3Q9H9T3 547 aa20.87■□□□□ 0.93
COL16A1-204ENST00000440437 TESPA1A2RU30 521 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-204ENST00000440437 GNAI2P04899 355 aa20.86■□□□□ 0.93
COL16A1-204ENST00000440437 VGLL4Q14135 290 aa20.86■□□□□ 0.93
COL16A1-204ENST00000440437 DIXDC1Q155Q3 683 aa20.86■□□□□ 0.93
COL16A1-204ENST00000440437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-204ENST00000440437 PDS5AQ29RF7 1337 aaKnown RBP20.85■□□□□ 0.93
COL16A1-204ENST00000440437 A0A1B0GUL7 405 aa20.85■□□□□ 0.93
COL16A1-204ENST00000440437 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
COL16A1-204ENST00000440437 TIMM10P62072 90 aa20.85■□□□□ 0.93
COL16A1-204ENST00000440437 TFCP2Q12800 502 aa20.85■□□□□ 0.93
COL16A1-204ENST00000440437 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
COL16A1-204ENST00000440437 TMEM57Q8N5G2 664 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms