RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CASP8AP2Q9UKL3 1982 aa24.67■■□□□ 1.54
SHROOM1-204ENST00000440118 MAST3O60307 1309 aa24.66■■□□□ 1.54
SHROOM1-204ENST00000440118 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.66■■□□□ 1.54
SHROOM1-204ENST00000440118 TNNQ9UQP3 1299 aa24.66■■□□□ 1.54
SHROOM1-204ENST00000440118 GNAI2P04899 355 aa24.65■■□□□ 1.54
SHROOM1-204ENST00000440118 SUPT20HL1Q3ZLR7 823 aa24.65■■□□□ 1.54
SHROOM1-204ENST00000440118 DZIP1LQ8IYY4 767 aaKnown RBP24.65■■□□□ 1.54
SHROOM1-204ENST00000440118 TEKT1Q969V4 418 aa24.65■■□□□ 1.54
SHROOM1-204ENST00000440118 COPRSQ9NQ92 184 aa24.65■■□□□ 1.54
SHROOM1-204ENST00000440118 PPP1R12BO60237 982 aaPredicted RBP24.64■■□□□ 1.54
SHROOM1-204ENST00000440118 SPDYE2Q495Y8 402 aa24.64■■□□□ 1.54
SHROOM1-204ENST00000440118 REM2Q8IYK8 340 aaPredicted RBP24.64■■□□□ 1.54
SHROOM1-204ENST00000440118 TDRD3Q9H7E2 651 aaKnown RBP24.64■■□□□ 1.54
SHROOM1-204ENST00000440118 ZNF70Q9UC06 446 aaPredicted RBP24.64■■□□□ 1.54
SHROOM1-204ENST00000440118 TNNI2P48788 182 aa24.63■■□□□ 1.53
SHROOM1-204ENST00000440118 WDR66Q8TBY9 1149 aa24.63■■□□□ 1.53
SHROOM1-204ENST00000440118 TMOD2Q9NZR1 351 aa24.63■■□□□ 1.53
SHROOM1-204ENST00000440118 AOX1Q06278 1338 aa24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 MKRN3Q13064 507 aaKnown RBP24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 RASA3Q14644 834 aa24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 GRIK5Q16478 980 aa24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 TMEM57Q8N5G2 664 aa24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 SAGE1Q9NXZ1 904 aa24.62■■□□□ 1.53
SHROOM1-204ENST00000440118 TCP10L2B9ZVM9 353 aa24.61■■□□□ 1.53
SHROOM1-204ENST00000440118 HDLBPQ00341 1268 aaKnown RBP24.61■■□□□ 1.53
SHROOM1-204ENST00000440118 FZD1Q9UP38 647 aa24.61■■□□□ 1.53
SHROOM1-204ENST00000440118 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
SHROOM1-204ENST00000440118 SSC5DA1L4H1 1573 aa24.6■■□□□ 1.53
SHROOM1-204ENST00000440118 TRPA1O75762 1119 aa24.6■■□□□ 1.53
SHROOM1-204ENST00000440118 MTX1Q13505 466 aa24.6■■□□□ 1.53
SHROOM1-204ENST00000440118 ITPRIPQ8IWB1 547 aa24.6■■□□□ 1.53
SHROOM1-204ENST00000440118 CSRNP1Q96S65 589 aa24.6■■□□□ 1.53
SHROOM1-204ENST00000440118 IREB2P48200 963 aaKnown RBP24.59■■□□□ 1.53
SHROOM1-204ENST00000440118 NBPF12Q5TAG4 269 aaPredicted RBP24.59■■□□□ 1.53
SHROOM1-204ENST00000440118 RNF186Q9NXI6 227 aa24.59■■□□□ 1.53
SHROOM1-204ENST00000440118 AKAP2Q9Y2D5 859 aa24.59■■□□□ 1.53
SHROOM1-204ENST00000440118 OTOFQ9HC10 1997 aa24.58■■□□□ 1.53
SHROOM1-204ENST00000440118 DENND2AQ9ULE3 1009 aa24.58■■□□□ 1.53
SHROOM1-204ENST00000440118 AK9Q5TCS8 1911 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 SEMA3EO15041 775 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 PHKA1P46020 1223 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 SREBF2Q12772 1141 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 SLC10A4Q96EP9 437 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 ZDHHC15Q96MV8 337 aa24.57■■□□□ 1.52
SHROOM1-204ENST00000440118 ADORA1P30542 326 aa24.56■■□□□ 1.52
SHROOM1-204ENST00000440118 TFCP2Q12800 502 aa24.56■■□□□ 1.52
SHROOM1-204ENST00000440118 G3BP1Q13283 466 aaKnown RBP eCLIP24.56■■□□□ 1.52
SHROOM1-204ENST00000440118 A0A1B0GUL7 405 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 LDHBP07195 334 aaKnown RBP24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 CACNB3P54284 484 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 OS9Q13438 667 aaPredicted RBP24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 LDLRAD1Q5T700 205 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 GORABQ5T7V8 394 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 CCDC102BQ68D86 513 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 NEUROD6Q96NK8 337 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 TMEM39BQ9GZU3 492 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 MYH2Q9UKX2 1941 aa24.55■■□□□ 1.52
SHROOM1-204ENST00000440118 MVPQ14764 893 aaKnown RBP24.54■■□□□ 1.52
SHROOM1-204ENST00000440118 MAP3K11Q16584 847 aa24.54■■□□□ 1.52
SHROOM1-204ENST00000440118 ZGPATQ8N5A5 531 aaKnown RBP24.54■■□□□ 1.52
SHROOM1-204ENST00000440118 PNMA6EA0A0J9YXQ4 647 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 TIMM10P62072 90 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 SPRYD7Q5W111 196 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 CLMNQ96JQ2 1002 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 MRIQ9BWK5 157 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 C1orf115Q9H7X2 142 aa24.53■■□□□ 1.52
SHROOM1-204ENST00000440118 PRDX5P30044 214 aa24.52■■□□□ 1.52
SHROOM1-204ENST00000440118 ANKRD13AQ8IZ07 590 aa24.52■■□□□ 1.52
SHROOM1-204ENST00000440118 XAGE2Q96GT9 111 aa24.52■■□□□ 1.52
SHROOM1-204ENST00000440118 ABHD8Q96I13 439 aa24.52■■□□□ 1.52
SHROOM1-204ENST00000440118 UNCXA6NJT0 531 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 DGKZQ13574 1117 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 DIXDC1Q155Q3 683 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 DZIP1Q86YF9 867 aaKnown RBP24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 WNK4Q96J92 1243 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 ABCF2Q9UG63 623 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 SALL1Q9NSC2 1324 aa24.51■■□□□ 1.51
SHROOM1-204ENST00000440118 USP2O75604 605 aaPredicted RBP24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 ZBTB48P10074 688 aaPredicted RBP24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 RASGRF1Q13972 1273 aa24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 APOBEC3HQ6NTF7 200 aaKnown RBP24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 HOOK2Q96ED9 719 aa24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 DAGLAQ9Y4D2 1042 aa24.5■■□□□ 1.51
SHROOM1-204ENST00000440118 MANSC4A6NHS7 340 aaPredicted RBP24.49■■□□□ 1.51
SHROOM1-204ENST00000440118 CDAN1Q8IWY9 1227 aa24.49■■□□□ 1.51
SHROOM1-204ENST00000440118 TEPSINQ96N21 525 aa24.49■■□□□ 1.51
SHROOM1-204ENST00000440118 CSADQ9Y600 493 aa24.49■■□□□ 1.51
SHROOM1-204ENST00000440118 LAMB1P07942 1786 aa24.49■■□□□ 1.51
SHROOM1-204ENST00000440118 RLBP1P12271 317 aa24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 TM4SF4P48230 202 aa24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 FKBP1CQ5VVH2 108 aa24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 SPTY2D1Q68D10 685 aaPredicted RBP24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 FAM83AQ86UY5 434 aa24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 ELP3Q9H9T3 547 aa24.48■■□□□ 1.51
SHROOM1-204ENST00000440118 TBC1D8O95759 1140 aa24.47■■□□□ 1.51
SHROOM1-204ENST00000440118 MS4A1P11836 297 aa24.47■■□□□ 1.51
SHROOM1-204ENST00000440118 SLF2Q8IX21 1173 aa24.47■■□□□ 1.51
SHROOM1-204ENST00000440118 MCOLN1Q9GZU1 580 aa24.47■■□□□ 1.51
SHROOM1-204ENST00000440118 RPAP1Q9BWH6 1393 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms