RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 GOLGA8CPA6NN73 597 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 MYCNP04198 464 aaPredicted RBP8.48□□□□□ -1.05
TSC1-203ENST00000440111 XRCC6P12956 609 aaKnown RBP eCLIP8.48□□□□□ -1.05
TSC1-203ENST00000440111 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 PATL1Q86TB9 770 aaKnown RBP8.48□□□□□ -1.05
TSC1-203ENST00000440111 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
TSC1-203ENST00000440111 ALKQ9UM73 1620 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 PFDN6O15212 129 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 MAP3K21Q5TCX8 1036 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 KSR2Q6VAB6 950 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 CCDC50Q8IVM0 306 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 UPF3BQ9BZI7 483 aaKnown RBP8.48□□□□□ -1.05
TSC1-203ENST00000440111 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
TSC1-203ENST00000440111 ATP10DQ9P241 1426 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 NCOA3Q9Y6Q9 1424 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 A0A1B0GUA9 196 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 IGSF3O75054 1194 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 KIF5BP33176 963 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■■■□ 24.4
TSC1-203ENST00000440111 NAA25Q14CX7 972 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 DBN1Q16643 649 aa8.48□□□□□ -1.05
TSC1-203ENST00000440111 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 GOLGA6BA6NDN3 693 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 RILPL1Q5EBL4 403 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 CCDC125Q86Z20 511 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 LMBR1Q8WVP7 490 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 TPCN1Q9ULQ1 816 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 NUP62CLQ9H1M0 184 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 ANTXR1Q9H6X2 564 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 CEP57Q86XR8 500 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 FAM169AQ9Y6X4 670 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 BMP15O95972 392 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 SFPQP23246 707 aaKnown RBP eCLIP8.47□□□□□ -1.05
TSC1-203ENST00000440111 CDR2Q01850 454 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 ARHGAP24Q8N264 748 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 GEN1Q17RS7 908 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 CCDC124Q96CT7 223 aaKnown RBP8.47□□□□□ -1.05
TSC1-203ENST00000440111 SDSP20132 328 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 CCT6AP40227 531 aaKnown RBP8.47□□□□□ -1.05
TSC1-203ENST00000440111 CAVIN4Q5BKX8 364 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 IP6K1Q92551 441 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.47□□□□□ -1.05
TSC1-203ENST00000440111 NSMCE1Q8WV22 266 aa8.47□□□□□ -1.05
TSC1-203ENST00000440111 RNF41Q9H4P4 317 aaPredicted RBP8.47□□□□□ -1.05
TSC1-203ENST00000440111 ERCC6L2Q5T890 1561 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 CTAGE6Q86UF2 777 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 ATP2B1P20020 1258 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 TTC31Q49AM3 519 aaPredicted RBP8.46□□□□□ -1.05
TSC1-203ENST00000440111 FBXO31Q5XUX0 539 aaPredicted RBP8.46□□□□□ -1.05
TSC1-203ENST00000440111 AP1ARQ63HQ0 302 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 MCM10Q7L590 875 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 CCDC63Q8NA47 563 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 LLPHQ9BRT6 129 aaKnown RBP8.46□□□□□ -1.05
TSC1-203ENST00000440111 A6NNZ2 444 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 BTBD11A6QL63 1104 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 TUBB8Q3ZCM7 444 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 CNPY4Q8N129 248 aa8.46□□□□□ -1.05
TSC1-203ENST00000440111 F8W8V4 182 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 ZSCAN22P10073 491 aaPredicted RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 PRPF38AQ8NAV1 312 aaKnown RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 IFT81Q8WYA0 676 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 ATP6V0A1Q93050 837 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 ZNF622Q969S3 477 aaKnown RBP eCLIP8.46□□□□□ -1.065e-7■□□□□ 10.7
TSC1-203ENST00000440111 TCP11L1Q9NUJ3 509 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 SLMAPQ14BN4 828 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 SSH3Q8TE77 659 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 MAK16Q9BXY0 300 aaKnown RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.46□□□□□ -1.06
TSC1-203ENST00000440111 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 ORC3Q9UBD5 711 aaPredicted RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 PDE1CQ14123 709 aaPredicted RBP8.46□□□□□ -1.06
TSC1-203ENST00000440111 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
TSC1-203ENST00000440111 CALM1P0DP23 149 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 CALM2P0DP24 149 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 CALM3P0DP25 149 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 HSPA8P11142 646 aaKnown RBP8.45□□□□□ -1.06
TSC1-203ENST00000440111 MTX1Q13505 466 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 CLUL1Q15846 466 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 SLC4A8Q2Y0W8 1093 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 IQCA1Q86XH1 822 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 ZKSCAN5Q9Y2L8 839 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 FAM200AQ8TCP9 573 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 BICD1Q96G01 975 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 ANGPTL3Q9Y5C1 460 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 GOLGA8QA0A0J9YX86 632 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 GOLGA8OA6NCC3 632 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 GOLGA8NF8WBI6 632 aa8.45□□□□□ -1.06
TSC1-203ENST00000440111 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
TSC1-203ENST00000440111 RSRC1Q96IZ7 334 aaKnown RBP8.45□□□□□ -1.06
TSC1-203ENST00000440111 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
TSC1-203ENST00000440111 LARP1BQ659C4 914 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms