RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 PSMD6Q15008 389 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 RSRC1Q96IZ7 334 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 KIF2CQ99661 725 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 CHL1O00533 1208 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 MRFAP1L1Q96HT8 127 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 KAT14Q9H8E8 782 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 ABCC1P33527 1531 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 GRM8O00222 908 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 TTC31Q49AM3 519 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 MPHOSPH6Q99547 160 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 PSMA4P25789 261 aaKnown RBP13.08□□□□□ -0.32
CCBE1-202ENST00000439986 SATB1Q01826 763 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 CALML4Q96GE6 196 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 RABEP2Q9H5N1 569 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 RAD50Q92878 1312 aa13.08□□□□□ -0.32
CCBE1-202ENST00000439986 PICALMQ13492 652 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 SYT10Q6XYQ8 523 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 EHMT1Q9H9B1 1298 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 HOMER2Q9NSB8 354 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
CCBE1-202ENST00000439986 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-202ENST00000439986 CCDC196A0A1B0GTZ2 297 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 AKNAD1Q5T1N1 836 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 NGLY1Q96IV0 654 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 AFMP43652 599 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 SPATS2LQ9NUQ6 558 aaKnown RBP13.07□□□□□ -0.32
CCBE1-202ENST00000439986 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
CCBE1-202ENST00000439986 NCOA7Q8NI08 942 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 IFNKQ9P0W0 207 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 PALD1Q9ULE6 856 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 HSPA4P34932 840 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCBE1-202ENST00000439986 TPD52P55327 224 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-202ENST00000439986 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 ZC4H2Q9NQZ6 224 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 TUBB4AP04350 444 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 CBX8Q9HC52 389 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
CCBE1-202ENST00000439986 PAFAH1B1P43034 410 aa13.06□□□□□ -0.32
CCBE1-202ENST00000439986 FGFR1OPO95684 399 aaKnown RBP13.05□□□□□ -0.32
CCBE1-202ENST00000439986 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CCBE1-202ENST00000439986 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 A0A1B0GUA9 196 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 SPTLC2O15270 562 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 ZNF75DP51815 510 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-202ENST00000439986 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 MCM3P25205 808 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 GRIPAP1Q4V328 841 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 KDM5DQ9BY66 1539 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 NAP1L3Q99457 506 aaPredicted RBP13.05□□□□□ -0.32
CCBE1-202ENST00000439986 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
CCBE1-202ENST00000439986 MCM6Q14566 821 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 EYA1Q99502 592 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 AOX1Q06278 1338 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 PLS1Q14651 629 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
CCBE1-202ENST00000439986 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
CCBE1-202ENST00000439986 TTC21AQ8NDW8 1320 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 BCORL1Q5H9F3 1711 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 YTHDC2Q9H6S0 1430 aaKnown RBP13.04□□□□□ -0.32
CCBE1-202ENST00000439986 PABPN1LA6NDY0 278 aaKnown RBP13.04□□□□□ -0.32
CCBE1-202ENST00000439986 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 GOLGA6CA6NDK9 693 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 GOLGA6DP0CG33 693 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 GOLGA6AQ9NYA3 693 aa13.04□□□□□ -0.32
CCBE1-202ENST00000439986 FLT4P35916 1363 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms