RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 SOGA3Q5TF21 947 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 CERS5Q8N5B7 392 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 USP26Q9BXU7 913 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 C22orf23Q9BZE7 217 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.48
CBX5-202ENST00000439541 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 SALL1Q9NSC2 1324 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 PRELPP51888 382 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 UBE3CQ15386 1083 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 WDR66Q8TBY9 1149 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
CBX5-202ENST00000439541 HELLSQ9NRZ9 838 aa12.02□□□□□ -0.49
CBX5-202ENST00000439541 FAM205AQ6ZU69 1335 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 F8W031 263 aaPredicted RBP12.01□□□□□ -0.49
CBX5-202ENST00000439541 ZBTB22O15209 634 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 GPAA1O43292 621 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 MBD4O95243 580 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 CYP7A1P22680 504 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 IARSP41252 1262 aaKnown RBP12.01□□□□□ -0.49
CBX5-202ENST00000439541 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
CBX5-202ENST00000439541 ZSCAN25Q6NSZ9 544 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 DZIP1Q86YF9 867 aaKnown RBP12.01□□□□□ -0.49
CBX5-202ENST00000439541 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
CBX5-202ENST00000439541 FOXP2O15409 715 aa12□□□□□ -0.49
CBX5-202ENST00000439541 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
CBX5-202ENST00000439541 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
CBX5-202ENST00000439541 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
CBX5-202ENST00000439541 NAA16Q6N069 864 aaPredicted RBP12□□□□□ -0.49
CBX5-202ENST00000439541 LCORLQ8N3X6 602 aa12□□□□□ -0.49
CBX5-202ENST00000439541 ARMT1Q9H993 441 aa12□□□□□ -0.49
CBX5-202ENST00000439541 YBX3P16989 372 aaKnown RBP eCLIP12□□□□□ -0.49
CBX5-202ENST00000439541 KIAA1211Q6ZU35 1233 aa12□□□□□ -0.49
CBX5-202ENST00000439541 PODNQ7Z5L7 613 aa12□□□□□ -0.49
CBX5-202ENST00000439541 RAD17O75943 681 aa11.99□□□□□ -0.49
CBX5-202ENST00000439541 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
CBX5-202ENST00000439541 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
CBX5-202ENST00000439541 ZGPATQ8N5A5 531 aaKnown RBP11.99□□□□□ -0.49
CBX5-202ENST00000439541 AIDAQ96BJ3 306 aa11.99□□□□□ -0.49
CBX5-202ENST00000439541 RBM8AQ9Y5S9 174 aaKnown RBP11.99□□□□□ -0.49
CBX5-202ENST00000439541 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
CBX5-202ENST00000439541 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
CBX5-202ENST00000439541 RBM25P49756 843 aaKnown RBP11.98□□□□□ -0.49
CBX5-202ENST00000439541 NIM1KQ8IY84 436 aa11.98□□□□□ -0.49
CBX5-202ENST00000439541 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
CBX5-202ENST00000439541 TAF6LQ9Y6J9 622 aa11.98□□□□□ -0.49
CBX5-202ENST00000439541 PSME4Q14997 1843 aa11.98□□□□□ -0.49
CBX5-202ENST00000439541 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 PRKAB2O43741 272 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 HSPD1P10809 573 aaKnown RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 SCNN1DP51172 638 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 TICAM2Q86XR7 235 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 KIAA0825Q8IV33 1275 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 STRBPQ96SI9 672 aaKnown RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 KIF2CQ99661 725 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 RIOK1Q9BRS2 568 aaKnown RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBX5-202ENST00000439541 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 MAGEB6P1A0A0J9YX57 407 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 ARHGAP27Q6ZUM4 889 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 MAP4K1Q92918 833 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 EPB41L4AQ9HCS5 686 aaPredicted RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 TTF2Q9UNY4 1162 aaKnown RBP11.97□□□□□ -0.49
CBX5-202ENST00000439541 MROH7-TTC4A0A0A0MT08 1334 aa11.97□□□□□ -0.49
CBX5-202ENST00000439541 PSMD14O00487 310 aa11.96□□□□□ -0.49
CBX5-202ENST00000439541 HSPA4P34932 840 aa11.96□□□□□ -0.49
CBX5-202ENST00000439541 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
CBX5-202ENST00000439541 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
CBX5-202ENST00000439541 PCDHAC2Q9Y5I4 1007 aa11.96□□□□□ -0.49
CBX5-202ENST00000439541 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.5
CBX5-202ENST00000439541 COL9A3Q14050 684 aaPredicted RBP11.95□□□□□ -0.5
CBX5-202ENST00000439541 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
CBX5-202ENST00000439541 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 SLC27A2O14975 620 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
CBX5-202ENST00000439541 BTDP43251 543 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 CXCL9Q07325 125 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 CREB3L3Q68CJ9 461 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
CBX5-202ENST00000439541 DSCC1Q9BVC3 393 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 SNX14Q9Y5W7 946 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
CBX5-202ENST00000439541 APPP05067 770 aa11.94□□□□□ -0.5
CBX5-202ENST00000439541 MCCP23508 829 aa11.94□□□□□ -0.5
CBX5-202ENST00000439541 HAND2P61296 217 aa11.94□□□□□ -0.5
CBX5-202ENST00000439541 GSTO1P78417 241 aa11.94□□□□□ -0.5
CBX5-202ENST00000439541 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms