RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
SCLT1-202ENST00000439369 PSMD14O00487 310 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 LDHCP07864 332 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 CHMLP26374 656 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 PRDX5P30044 214 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 SLC9C2Q5TAH2 1124 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
SCLT1-202ENST00000439369 CERS3Q8IU89 383 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 CERS5Q8N5B7 392 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 APPBP2Q92624 585 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 NSUN4Q96CB9 384 aaKnown RBP15.31■□□□□ 0.04
SCLT1-202ENST00000439369 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
SCLT1-202ENST00000439369 GMLQ99445 158 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 RAD50Q92878 1312 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 CCDC88AQ3V6T2 1871 aa15.31■□□□□ 0.04
SCLT1-202ENST00000439369 TCRBV5S4A2TA0A5A2 114 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 RAD17O75943 681 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 MYH7P12883 1935 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 MECOMQ03112 1051 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 NAA16Q6N069 864 aaPredicted RBP15.3■□□□□ 0.04
SCLT1-202ENST00000439369 GPC2Q8N158 579 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 DPF2Q92785 391 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
SCLT1-202ENST00000439369 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
SCLT1-202ENST00000439369 HHIPL2Q6UWX4 724 aa15.29■□□□□ 0.04
SCLT1-202ENST00000439369 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SCLT1-202ENST00000439369 SERPINA10Q9UK55 444 aa15.29■□□□□ 0.04
SCLT1-202ENST00000439369 JAG2Q9Y219 1238 aa15.29■□□□□ 0.04
SCLT1-202ENST00000439369 GAKO14976 1311 aa15.28■□□□□ 0.04
SCLT1-202ENST00000439369 ZNF532Q9HCE3 1301 aa15.28■□□□□ 0.04
SCLT1-202ENST00000439369 CYP7A1P22680 504 aa15.28■□□□□ 0.04
SCLT1-202ENST00000439369 HDAC9Q9UKV0 1011 aa15.28■□□□□ 0.04
SCLT1-202ENST00000439369 TTF2Q9UNY4 1162 aaKnown RBP15.28■□□□□ 0.04
SCLT1-202ENST00000439369 MROH7-TTC4A0A0A0MT08 1334 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.04
SCLT1-202ENST00000439369 MCMDC2Q4G0Z9 681 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 OGFOD1Q8N543 542 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 ZNF384Q8TF68 577 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 TEKT1Q969V4 418 aa15.27■□□□□ 0.04
SCLT1-202ENST00000439369 SGSM2O43147 1006 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 EPB41L2O43491 1005 aaKnown RBP15.26■□□□□ 0.03
SCLT1-202ENST00000439369 BAG3O95817 575 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 PLCG2P16885 1265 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
SCLT1-202ENST00000439369 PPP4CP60510 307 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 GRIK5Q16478 980 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 MTMR14Q8NCE2 650 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 NOL10Q9BSC4 688 aaKnown RBP15.26■□□□□ 0.03
SCLT1-202ENST00000439369 ESYT1Q9BSJ8 1104 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 MXD3Q9BW11 206 aa15.26■□□□□ 0.03
SCLT1-202ENST00000439369 MYO5AQ9Y4I1 1855 aaKnown RBP15.25■□□□□ 0.03
SCLT1-202ENST00000439369 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
SCLT1-202ENST00000439369 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
SCLT1-202ENST00000439369 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
SCLT1-202ENST00000439369 OSBP2Q969R2 916 aa15.25■□□□□ 0.03
SCLT1-202ENST00000439369 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
SCLT1-202ENST00000439369 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-202ENST00000439369 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 MAGEB6P1A0A0J9YX57 407 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 REC8O95072 547 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 GNAT2P19087 354 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 CRKP46108 304 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-202ENST00000439369 L3MBTL3Q96JM7 780 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-202ENST00000439369 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-202ENST00000439369 DAGLAQ9Y4D2 1042 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
SCLT1-202ENST00000439369 DIXDC1Q155Q3 683 aa15.23■□□□□ 0.03
SCLT1-202ENST00000439369 AIDAQ96BJ3 306 aa15.23■□□□□ 0.03
SCLT1-202ENST00000439369 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
SCLT1-202ENST00000439369 PUS7LQ9H0K6 701 aaKnown RBP15.23■□□□□ 0.03
SCLT1-202ENST00000439369 MYH2Q9UKX2 1941 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-202ENST00000439369 M0R2C6 588 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 GPAA1O43292 621 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 ADGRA1Q86SQ6 560 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 STRBPQ96SI9 672 aaKnown RBP15.22■□□□□ 0.03
SCLT1-202ENST00000439369 GPRC5DQ9NZD1 345 aa15.22■□□□□ 0.03
SCLT1-202ENST00000439369 H7C1D1 291 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 MBD4O95243 580 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 CHGBP05060 677 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 BTDP43251 543 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 SCNN1DP51172 638 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 MICALL2Q8IY33 904 aa15.21■□□□□ 0.03
SCLT1-202ENST00000439369 ZBED3Q96IU2 234 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-202ENST00000439369 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms