RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ZNF609O15014 1411 aa8.63□□□□□ -1.03
ERCC8-203ENST00000439176 THSD7BQ9C0I4 1608 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 CCDC85CA6NKD9 419 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 VAMP4O75379 141 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 RGS20O76081 388 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 E2F4Q16254 413 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 TTLL5Q6EMB2 1281 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 GMLQ99445 158 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 SAGE1Q9NXZ1 904 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
ERCC8-203ENST00000439176 CSF1RP07333 972 aa8.61□□□□□ -1.03
ERCC8-203ENST00000439176 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-203ENST00000439176 EXOSC9Q06265 439 aaKnown RBP8.61□□□□□ -1.03
ERCC8-203ENST00000439176 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-203ENST00000439176 CCDC57Q2TAC2 916 aa8.61□□□□□ -1.03
ERCC8-203ENST00000439176 FAM161AQ3B820 660 aa8.61□□□□□ -1.03
ERCC8-203ENST00000439176 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
ERCC8-203ENST00000439176 DLK2Q6UY11 383 aa8.61□□□□□ -1.03
ERCC8-203ENST00000439176 C9orf78Q9NZ63 289 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-203ENST00000439176 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
ERCC8-203ENST00000439176 MYH3P11055 1940 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 COL4A1P02462 1669 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-203ENST00000439176 MYO1BO43795 1136 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 SLC10A3P09131 477 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 CHRNDQ07001 517 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 ZNF804AQ7Z570 1209 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 APOBEC3FQ8IUX4 373 aaKnown RBP8.6□□□□□ -1.03
ERCC8-203ENST00000439176 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 SCN9AQ15858 1988 aa8.6□□□□□ -1.03
ERCC8-203ENST00000439176 ASTN2O75129 1339 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-203ENST00000439176 WNT10BO00744 389 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 TRPA1O75762 1119 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 CASP7P55210 303 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 GTF2IP78347 998 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 DGKZQ13574 1117 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 NBPF9Q3BBW0 867 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 SLC4A10Q6U841 1118 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 ARMC9Q7Z3E5 817 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.03
ERCC8-203ENST00000439176 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
ERCC8-203ENST00000439176 F6X3S4 739 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 GRM8O00222 908 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 EVI5O60447 810 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 ALDH1L1O75891 902 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 DLGAP5Q15398 846 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 LDHAL6AQ6ZMR3 332 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 C15orf52Q6ZUT6 534 aaKnown RBP8.58□□□□□ -1.04
ERCC8-203ENST00000439176 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 KCTD12Q96CX2 325 aaKnown RBP8.58□□□□□ -1.04
ERCC8-203ENST00000439176 CSRNP1Q96S65 589 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 MXD3Q9BW11 206 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 SRCIN1Q9C0H9 1055 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 CD209Q9NNX6 404 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 RNF186Q9NXI6 227 aa8.58□□□□□ -1.04
ERCC8-203ENST00000439176 UBE2Q2LH0YL09 131 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 PLIN1O60240 522 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 TAF5LO75529 589 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 SASH1O94885 1247 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 FKBP1AP62942 108 aaKnown RBP8.57□□□□□ -1.04
ERCC8-203ENST00000439176 FOXO4P98177 505 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 MLLT1Q03111 559 aaPredicted RBP8.57□□□□□ -1.04
ERCC8-203ENST00000439176 SREBF2Q12772 1141 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 RASAL3Q86YV0 1011 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 PSME4Q14997 1843 aa8.57□□□□□ -1.04
ERCC8-203ENST00000439176 PAPPA2Q9BXP8 1791 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 CASP8AP2Q9UKL3 1982 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 DPYSL4O14531 572 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-203ENST00000439176 IL1R1P14778 569 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 KLRK1P26718 216 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 RBM5P52756 815 aaKnown RBP eCLIP8.56□□□□□ -1.04
ERCC8-203ENST00000439176 SUPT20HL1Q3ZLR7 823 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 PRAMEF18Q5VWM3 479 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 VPS37DQ86XT2 251 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-203ENST00000439176 SCAF8Q9UPN6 1271 aaKnown RBP8.56□□□□□ -1.04
ERCC8-203ENST00000439176 PPP2R3BQ9Y5P8 575 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 SPEF2Q9C093 1822 aa8.56□□□□□ -1.04
ERCC8-203ENST00000439176 AKAP11Q9UKA4 1901 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 F8W031 263 aaPredicted RBP8.55□□□□□ -1.04
ERCC8-203ENST00000439176 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 TNFAIP1Q13829 316 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 UBE4AQ14139 1066 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 PKN2Q16513 984 aaKnown RBP8.55□□□□□ -1.04
ERCC8-203ENST00000439176 MOB2Q70IA6 237 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 CTU1Q7Z7A3 348 aaKnown RBP8.55□□□□□ -1.04
ERCC8-203ENST00000439176 MTMR14Q8NCE2 650 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 DEFB129Q9H1M3 183 aa8.55□□□□□ -1.04
ERCC8-203ENST00000439176 ANGEL1Q9UNK9 670 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms