RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CACNA2D4Q7Z3S7 1137 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 AOPEPQ8N6M6 819 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 PHKBQ93100 1093 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 RRAGDQ9NQL2 400 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 TULP4Q9NRJ4 1543 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 PPP1R12BO60237 982 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 RASEFQ8IZ41 740 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 ZNF397Q8NF99 534 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-205ENST00000439160 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 PRM3Q9NNZ6 103 aa14.08□□□□□ -0.16
TCOF1-205ENST00000439160 CALML3P27482 149 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 STAT6P42226 847 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 LMOD1P29536 600 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-205ENST00000439160 IL6STP40189 918 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-205ENST00000439160 EIF6P56537 245 aaKnown RBP14.07□□□□□ -0.16
TCOF1-205ENST00000439160 TTC6Q86TZ1 520 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 DSCC1Q9BVC3 393 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 V9GY48 417 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-205ENST00000439160 APBA3O96018 575 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 MCM7P33993 719 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 TNNI2P48788 182 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 WDR66Q8TBY9 1149 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
TCOF1-205ENST00000439160 KRT2P35908 639 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 PHKA1P46020 1223 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 PKP1Q13835 747 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
TCOF1-205ENST00000439160 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 PDE8BO95263 885 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 PDE6AP16499 860 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 PYM1Q9BRP8 204 aaKnown RBP14.06□□□□□ -0.16
TCOF1-205ENST00000439160 C6orf50Q9HD87 102 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 N4BP3O15049 544 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 UBASH3AP57075 661 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 RRP36Q96EU6 259 aaKnown RBP14.06□□□□□ -0.16
TCOF1-205ENST00000439160 QRICH2Q9H0J4 1663 aa14.06□□□□□ -0.16
TCOF1-205ENST00000439160 INO80Q9ULG1 1556 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-205ENST00000439160 URI1O94763 535 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 TNNT1P13805 278 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 SKIDA1Q1XH10 827 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 TCERG1LQ5VWI1 586 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 DPP8Q6V1X1 898 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 JDP2Q8WYK2 163 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 TRIM47Q96LD4 638 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 TMX1Q9H3N1 280 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 KIF18AQ8NI77 898 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 GSDMDP57764 484 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 ADCK5Q3MIX3 580 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 MAPKAPK5Q8IW41 473 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
TCOF1-205ENST00000439160 CHRNDQ07001 517 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 UBXN4Q92575 508 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 EHMT1Q9H9B1 1298 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 SEC31BQ9NQW1 1179 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
TCOF1-205ENST00000439160 SETBP1Q9Y6X0 1596 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 FGAP02671 866 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 SPA17Q15506 151 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 CCDC40Q4G0X9 1142 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 PLIN2Q99541 437 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 SASH1O94885 1247 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 ZNF174Q15697 407 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 LUZP1Q86V48 1076 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 SDR42E1Q8WUS8 393 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 CPSF1Q10570 1443 aaKnown RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 USP17L12C9JPN9 530 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 USP17L21D6R901 530 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 KIF20AO95235 890 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 LIG1P18858 919 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 TDRD12Q587J7 1177 aaKnown RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 PI16Q6UXB8 463 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
TCOF1-205ENST00000439160 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
TCOF1-205ENST00000439160 IGKV5-2P06315 115 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 MSL1Q68DK7 614 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 NLRP10Q86W26 655 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 TXLNBQ8N3L3 684 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 EXOC1Q9NV70 894 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 PTPRMP28827 1452 aa14.03□□□□□ -0.16
TCOF1-205ENST00000439160 DEXIO95424 95 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms