RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
SMPD4-208ENST00000439029 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
SMPD4-208ENST00000439029 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-208ENST00000439029 IRF6O14896 467 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 TAF5LO75529 589 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 HOXD10P28358 340 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-208ENST00000439029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMPD4-208ENST00000439029 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
SMPD4-208ENST00000439029 PAWRQ96IZ0 340 aaKnown RBP12.6□□□□□ -0.39
SMPD4-208ENST00000439029 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 GDF15Q99988 308 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 SNCAIPQ9Y6H5 919 aa12.6□□□□□ -0.39
SMPD4-208ENST00000439029 ALPK3Q96L96 1907 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 ELNP15502 786 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 SNAPC2Q13487 334 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-208ENST00000439029 METTL22Q9BUU2 404 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-208ENST00000439029 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
SMPD4-208ENST00000439029 CHRNDQ07001 517 aa12.58□□□□□ -0.4
SMPD4-208ENST00000439029 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
SMPD4-208ENST00000439029 FAM161BQ96MY7 647 aa12.58□□□□□ -0.4
SMPD4-208ENST00000439029 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
SMPD4-208ENST00000439029 UNC80Q8N2C7 3258 aa12.58□□□□□ -0.4
SMPD4-208ENST00000439029 PDHXO00330 501 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 HOXB7P09629 217 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 ITGA6P23229 1130 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 BMP8BP34820 402 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-208ENST00000439029 CACNB3P54284 484 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-208ENST00000439029 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
SMPD4-208ENST00000439029 ADCY3O60266 1144 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 INHAP05111 366 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 IGKV5-2P06315 115 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
SMPD4-208ENST00000439029 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 RAPGEFL1Q9UHV5 662 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 TTF2Q9UNY4 1162 aaKnown RBP12.56□□□□□ -0.4
SMPD4-208ENST00000439029 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 RPTORQ8N122 1335 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
SMPD4-208ENST00000439029 CYP2C8P10632 490 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 FCGRTP55899 365 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 PPIL2Q13356 520 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 ZNF804AQ7Z570 1209 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
SMPD4-208ENST00000439029 TDHQ8IZJ6 230 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-208ENST00000439029 GUCD1Q96NT3 240 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
SMPD4-208ENST00000439029 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
SMPD4-208ENST00000439029 ADGRA2Q96PE1 1338 aa12.55□□□□□ -0.4
SMPD4-208ENST00000439029 MYH3P11055 1940 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 PLIN1O60240 522 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 IL1R1P14778 569 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 FLT3LGP49771 235 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 NECAB2Q7Z6G3 386 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
SMPD4-208ENST00000439029 INPP5BP32019 993 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 TNNI2P48788 182 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 GRIK5Q16478 980 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 MFSD14BQ5SR56 506 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 ANKRD23Q86SG2 305 aa12.53□□□□□ -0.4
SMPD4-208ENST00000439029 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
SMPD4-208ENST00000439029 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
SMPD4-208ENST00000439029 COL9A1P20849 921 aa12.52□□□□□ -0.41
SMPD4-208ENST00000439029 CRKP46108 304 aa12.52□□□□□ -0.41
SMPD4-208ENST00000439029 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
SMPD4-208ENST00000439029 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
SMPD4-208ENST00000439029 TTC28Q96AY4 2481 aa12.52□□□□□ -0.41
SMPD4-208ENST00000439029 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 BCRP11274 1271 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 MOGSQ13724 837 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 CRISPLD2Q9H0B8 497 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 PAK6Q9NQU5 681 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-208ENST00000439029 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 VCANP13611 3396 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 MGAMO43451 1857 aa12.51□□□□□ -0.41
SMPD4-208ENST00000439029 NEURL1BA8MQ27 555 aa12.5□□□□□ -0.41
SMPD4-208ENST00000439029 H7C1W4 665 aa12.5□□□□□ -0.41
SMPD4-208ENST00000439029 PPATQ06203 517 aa12.5□□□□□ -0.41
SMPD4-208ENST00000439029 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
SMPD4-208ENST00000439029 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
SMPD4-208ENST00000439029 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
SMPD4-208ENST00000439029 TNPO2O14787 897 aaKnown RBP12.49□□□□□ -0.41
SMPD4-208ENST00000439029 GYG1P46976 350 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms