RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ZNF648Q5T619 568 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 DUSP27Q5VZP5 1158 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 SMG8Q8ND04 991 aaKnown RBP5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 OSMRQ99650 979 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 TMPRSS13Q9BYE2 586 aa5.34□□□□□ -1.55
HMGB1P12-201ENST00000438594 LOC100289279A0A1B0GTE1 492 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 TIAF1O95411 115 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 RPLP1P05386 114 aaKnown RBP5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 RAB6AP20340 208 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 GSTM4Q03013 218 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZAR1Q86SH2 424 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 CWC22Q9HCG8 908 aaKnown RBP5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 PRKAG2Q9UGJ0 569 aa5.33□□□□□ -1.56
HMGB1P12-201ENST00000438594 PPM1GO15355 546 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 DLGAP3O95886 979 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 ITGB5P18084 799 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 FAM69CQ0P6D2 419 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 COL19A1Q14993 1142 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZNF124Q15973 351 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 EXOSC6Q5RKV6 272 aaKnown RBP5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 TMEM102Q8N9M5 508 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 SUGCTQ9HAC7 445 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 PAK6Q9NQU5 681 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 IGSF5Q9NSI5 407 aa5.32□□□□□ -1.56
HMGB1P12-201ENST00000438594 SOX4Q06945 474 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 PLCL1Q15111 1095 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 VN1R5Q7Z5H4 357 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 C2CD4AQ8NCU7 369 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 PMEPA1Q969W9 287 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 NXPE3Q969Y0 559 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZKSCAN3Q9BRR0 538 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZC3H7BQ9UGR2 993 aaKnown RBP5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 SEPT3Q9UH03 358 aa5.31□□□□□ -1.56
HMGB1P12-201ENST00000438594 UNCXA6NJT0 531 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 NFICP08651 508 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 ELOAQ14241 798 aaKnown RBP5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 MAP7Q14244 749 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 TMEM164Q5U3C3 297 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 DYMQ7RTS9 669 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
HMGB1P12-201ENST00000438594 BIN1O00499 593 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 EREGO14944 169 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 PHACTR2O75167 634 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 ADH5P11766 374 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 AAMPQ13685 434 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 PKN1Q16512 942 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 AKAP4Q5JQC9 854 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 ZNF765Q7L2R6 523 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 LGR6Q9HBX8 967 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 RAD18Q9NS91 495 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 SLC5A6Q9Y289 635 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 ACTL7BQ9Y614 415 aa5.29□□□□□ -1.56
HMGB1P12-201ENST00000438594 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 PAPLNO95428 1278 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 PDGFAP04085 211 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 ESRRAP11474 423 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 EDN3P14138 238 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 NOM1Q5C9Z4 860 aaKnown RBP5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 XKR5Q6UX68 686 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 CERS3Q8IU89 383 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 CHRDQ9H2X0 955 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 AP4E1Q9UPM8 1137 aa5.28□□□□□ -1.56
HMGB1P12-201ENST00000438594 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 ATP2B4P23634 1241 aa5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 ZNF792Q3KQV3 632 aa5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 EZH1Q92800 747 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 SOX17Q9H6I2 414 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 BCCIPQ9P287 314 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P12-201ENST00000438594 DBX1A6NMT0 343 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 METTL12A8MUP2 240 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 MAOBP27338 520 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 MZF1P28698 734 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 ASPAP45381 313 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 KCNA1Q09470 495 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 BNIP3Q12983 259 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 TICAM2Q86XR7 235 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 KSR1Q8IVT5 923 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 BCL7CQ8WUZ0 217 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 GATA6Q92908 595 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 CLP1Q92989 425 aaKnown RBP5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 LATS2Q9NRM7 1088 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 DAGLAQ9Y4D2 1042 aa5.26□□□□□ -1.57
HMGB1P12-201ENST00000438594 PPP1R15AO75807 674 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 FARP2O94887 1054 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 MPSTP25325 297 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 CANXP27824 592 aaKnown RBP5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 POU4F3Q15319 338 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 CCDC27Q2M243 656 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 STK11IPQ8N1F8 1099 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 FAM168AQ92567 244 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 SEMA6CQ9H3T2 930 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 RC3H2Q9HBD1 1191 aaKnown RBP5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 FAM105AQ9NUU6 356 aa5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P12-201ENST00000438594 BRPF3Q9ULD4 1205 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms