RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
MUC1-211ENST00000438413 CD99L2Q8TCZ2 262 aa24.12■■□□□ 1.45
MUC1-211ENST00000438413 TEPSINQ96N21 525 aa24.12■■□□□ 1.45
MUC1-211ENST00000438413 PTPN18Q99952 460 aa24.12■■□□□ 1.45
MUC1-211ENST00000438413 BICC1Q9H694 974 aaKnown RBP24.12■■□□□ 1.45
MUC1-211ENST00000438413 TNNI2P48788 182 aa24.11■■□□□ 1.45
MUC1-211ENST00000438413 PCDH10Q9P2E7 1040 aa24.11■■□□□ 1.45
MUC1-211ENST00000438413 IQSEC3Q9UPP2 1182 aaPredicted RBP24.11■■□□□ 1.45
MUC1-211ENST00000438413 RBBP6Q7Z6E9 1792 aaKnown RBP24.11■■□□□ 1.45
MUC1-211ENST00000438413 INTS3Q68E01 1043 aaKnown RBP24.1■■□□□ 1.45
MUC1-211ENST00000438413 FBXO33Q7Z6M2 555 aa24.1■■□□□ 1.45
MUC1-211ENST00000438413 TMEM39BQ9GZU3 492 aa24.1■■□□□ 1.45
MUC1-211ENST00000438413 HTTP42858 3142 aa24.1■■□□□ 1.45
MUC1-211ENST00000438413 CHAF1AQ13111 956 aaPredicted RBP24.09■■□□□ 1.45
MUC1-211ENST00000438413 GRIK5Q16478 980 aa24.09■■□□□ 1.45
MUC1-211ENST00000438413 RABL6Q3YEC7 729 aaPredicted RBP24.09■■□□□ 1.45
MUC1-211ENST00000438413 LRRC24Q50LG9 513 aa24.09■■□□□ 1.45
MUC1-211ENST00000438413 METTL24Q5JXM2 366 aa24.09■■□□□ 1.45
MUC1-211ENST00000438413 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.09■■□□□ 1.45
MUC1-211ENST00000438413 PTPN22Q9Y2R2 807 aa24.09■■□□□ 1.45
MUC1-211ENST00000438413 FRAT2O75474 233 aaPredicted RBP24.08■■□□□ 1.45
MUC1-211ENST00000438413 SP3Q02447 781 aa24.08■■□□□ 1.45
MUC1-211ENST00000438413 CAVIN4Q5BKX8 364 aa24.08■■□□□ 1.45
MUC1-211ENST00000438413 MS4A4AQ96JQ5 239 aa24.08■■□□□ 1.45
MUC1-211ENST00000438413 HDLBPQ00341 1268 aaKnown RBP24.07■■□□□ 1.44
MUC1-211ENST00000438413 VGLL4Q14135 290 aa24.07■■□□□ 1.44
MUC1-211ENST00000438413 ANKRD44Q8N8A2 993 aa24.07■■□□□ 1.44
MUC1-211ENST00000438413 TBC1D22AQ8WUA7 517 aa24.07■■□□□ 1.44
MUC1-211ENST00000438413 CNKSR2Q8WXI2 1034 aa24.07■■□□□ 1.44
MUC1-211ENST00000438413 EFCC1Q9HA90 598 aa24.07■■□□□ 1.44
MUC1-211ENST00000438413 POTEFA5A3E0 1075 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 PDE8BO95263 885 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 MAP3K9P80192 1104 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 VGLL2Q8N8G2 317 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.06■■□□□ 1.44
MUC1-211ENST00000438413 TEKT1Q969V4 418 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 CSADQ9Y600 493 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 MYH13Q9UKX3 1938 aa24.06■■□□□ 1.44
MUC1-211ENST00000438413 CCL15-CCL14A0A0B4J2E2 113 aa24.05■■□□□ 1.44
MUC1-211ENST00000438413 CCL15Q16663 113 aa24.05■■□□□ 1.44
MUC1-211ENST00000438413 MRPL50Q8N5N7 158 aaKnown RBP24.05■■□□□ 1.44
MUC1-211ENST00000438413 BRI3BPQ8WY22 251 aa24.05■■□□□ 1.44
MUC1-211ENST00000438413 ZNF521Q96K83 1311 aa24.05■■□□□ 1.44
MUC1-211ENST00000438413 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
MUC1-211ENST00000438413 GTF2A2P52657 109 aa24.04■■□□□ 1.44
MUC1-211ENST00000438413 CACNB3P54284 484 aa24.04■■□□□ 1.44
MUC1-211ENST00000438413 OTUD5Q96G74 571 aa24.04■■□□□ 1.44
MUC1-211ENST00000438413 CAP1Q01518 475 aa24.03■■□□□ 1.44
MUC1-211ENST00000438413 TAF1CQ15572 869 aaPredicted RBP24.03■■□□□ 1.44
MUC1-211ENST00000438413 KLHDC4Q8TBB5 520 aa24.03■■□□□ 1.44
MUC1-211ENST00000438413 ZFYVE28Q9HCC9 887 aa24.03■■□□□ 1.44
MUC1-211ENST00000438413 PTPRCP08575 1304 aa24.03■■□□□ 1.44
MUC1-211ENST00000438413 CENPFP49454 3210 aa24.02■■□□□ 1.44
MUC1-211ENST00000438413 BCAMP50895 628 aa24.02■■□□□ 1.44
MUC1-211ENST00000438413 ARMC5Q96C12 935 aa24.02■■□□□ 1.44
MUC1-211ENST00000438413 ZDHHC15Q96MV8 337 aa24.02■■□□□ 1.44
MUC1-211ENST00000438413 TMOD2Q9NZR1 351 aa24.02■■□□□ 1.44
MUC1-211ENST00000438413 SPDYE5A6NIY4 337 aa24.01■■□□□ 1.43
MUC1-211ENST00000438413 FAM43AQ8N2R8 423 aa24.01■■□□□ 1.43
MUC1-211ENST00000438413 MAST3O60307 1309 aa24.01■■□□□ 1.43
MUC1-211ENST00000438413 PUM3Q15397 648 aaKnown RBP24■■□□□ 1.43
MUC1-211ENST00000438413 FAM83AQ86UY5 434 aa24■■□□□ 1.43
MUC1-211ENST00000438413 MRIQ9BWK5 157 aa24■■□□□ 1.43
MUC1-211ENST00000438413 SUGT1Q9Y2Z0 365 aa24■■□□□ 1.43
MUC1-211ENST00000438413 KIF16BQ96L93 1317 aa24■■□□□ 1.43
MUC1-211ENST00000438413 IFIT1P09914 478 aaKnown RBP23.99■■□□□ 1.43
MUC1-211ENST00000438413 ARHGEF6Q15052 776 aa23.99■■□□□ 1.43
MUC1-211ENST00000438413 APOBEC3HQ6NTF7 200 aaKnown RBP23.99■■□□□ 1.43
MUC1-211ENST00000438413 WRNIP1Q96S55 665 aa23.99■■□□□ 1.43
MUC1-211ENST00000438413 USP44Q9H0E7 712 aa23.99■■□□□ 1.43
MUC1-211ENST00000438413 SNCAIPQ9Y6H5 919 aa23.99■■□□□ 1.43
MUC1-211ENST00000438413 FGFR2P21802 821 aa23.98■■□□□ 1.43
MUC1-211ENST00000438413 FKBP1CQ5VVH2 108 aa23.98■■□□□ 1.43
MUC1-211ENST00000438413 ERO1BQ86YB8 467 aa23.98■■□□□ 1.43
MUC1-211ENST00000438413 HOOK2Q96ED9 719 aa23.98■■□□□ 1.43
MUC1-211ENST00000438413 ZSWIM8A7E2V4 1837 aa23.97■■□□□ 1.43
MUC1-211ENST00000438413 CETPP11597 493 aa23.97■■□□□ 1.43
MUC1-211ENST00000438413 SSH1Q8WYL5 1049 aa23.97■■□□□ 1.43
MUC1-211ENST00000438413 ZKSCAN4Q969J2 545 aaPredicted RBP23.97■■□□□ 1.43
MUC1-211ENST00000438413 GCC1Q96CN9 775 aa23.97■■□□□ 1.43
MUC1-211ENST00000438413 RPAP1Q9BWH6 1393 aaPredicted RBP23.97■■□□□ 1.43
MUC1-211ENST00000438413 KIAA0100Q14667 2235 aaKnown RBP23.96■■□□□ 1.43
MUC1-211ENST00000438413 WDHD1O75717 1129 aaPredicted RBP23.96■■□□□ 1.43
MUC1-211ENST00000438413 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
MUC1-211ENST00000438413 HHIPL2Q6UWX4 724 aa23.96■■□□□ 1.43
MUC1-211ENST00000438413 PTCH2Q9Y6C5 1203 aa23.96■■□□□ 1.43
MUC1-211ENST00000438413 MKI67P46013 3256 aaKnown RBP23.95■■□□□ 1.43
MUC1-211ENST00000438413 EYA2O00167 538 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 IRF6O14896 467 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 SLC5A1P13866 664 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 EN2P19622 333 aaPredicted RBP23.95■■□□□ 1.42
MUC1-211ENST00000438413 SLC9C1Q4G0N8 1177 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 DCAF15Q66K64 600 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 ZNF333Q96JL9 665 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 TMEM106CQ9BVX2 250 aa23.95■■□□□ 1.42
MUC1-211ENST00000438413 BRCA2P51587 3418 aa23.94■■□□□ 1.42
MUC1-211ENST00000438413 E9PSI1 815 aa23.94■■□□□ 1.42
MUC1-211ENST00000438413 TLR2O60603 784 aa23.94■■□□□ 1.42
MUC1-211ENST00000438413 RFX5P48382 616 aaPredicted RBP23.94■■□□□ 1.42
MUC1-211ENST00000438413 PPIL2Q13356 520 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms