RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 SHISA2Q6UWI4 295 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 SLC7A3Q8WY07 619 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 TMEM39AQ9NV64 488 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 IGHA1P01876 353 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 CYP11A1P05108 521 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 VAMP1P23763 118 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 CHRNA4P43681 627 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 GSTM4Q03013 218 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 CRELD1Q96HD1 420 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 NECAB3Q96P71 396 aaPredicted RBP4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 TRIM56Q9BRZ2 755 aaKnown RBP4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 PODXL2Q9NZ53 605 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 AKAP2Q9Y2D5 859 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 CTSHP09668 335 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 DUOXA2Q1HG44 320 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 HP1BP3Q5SSJ5 553 aaPredicted RBP4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 KIAA1211Q6ZU35 1233 aa4.39□□□□□ -1.71
AC009541.1-201ENST00000438279 USP31Q70CQ4 1352 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 LOC100289279A0A1B0GTE1 492 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 WISP1O95388 367 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 SCARA3Q6AZY7 606 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 TXNRD3Q86VQ6 643 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 WFDC12Q8WWY7 111 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 AKTIPQ9H8T0 292 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 MRS2Q9HD23 443 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 GPN3Q9UHW5 284 aaPredicted RBP4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 SYNGAP1Q96PV0 1343 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 DDX3YO15523 660 aaKnown RBP4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 NME2P22392 152 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 NLRP12P59046 1061 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 POU4F3Q15319 338 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 UBASH3BQ8TF42 649 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 EMILIN2Q9BXX0 1053 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 TMPRSS13Q9BYE2 586 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 USP21Q9UK80 565 aa4.38□□□□□ -1.71
AC009541.1-201ENST00000438279 ENC1O14682 589 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 NOS3P29474 1203 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 TAF1CQ15572 869 aaPredicted RBP4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 ACAD11Q709F0 780 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 FAM161BQ96MY7 647 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 SSBP4Q9BWG4 385 aaPredicted RBP4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 SUGCTQ9HAC7 445 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 KRT82Q9NSB4 513 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 VTI1BQ9UEU0 232 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 ARNTP27540 789 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 GATA4P43694 442 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 PDZD3Q86UT5 571 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 NOC4LQ9BVI4 516 aaKnown RBP4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 RUSC1Q9BVN2 902 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 RNF208Q9H0X6 261 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 CACNA2D2Q9NY47 1150 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 SAMM50Q9Y512 469 aa4.37□□□□□ -1.71
AC009541.1-201ENST00000438279 PROCP04070 461 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 EXOSC6Q5RKV6 272 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 ANKRD34AQ69YU3 496 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 TPTE2Q6XPS3 522 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 DZIP1LQ8IYY4 767 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 SMG8Q8ND04 991 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 CORO1BQ9BR76 489 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 GSTP1P09211 210 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 BMP6P22004 513 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 MAOBP27338 520 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 IREB2P48200 963 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 RPS26P62854 115 aaKnown RBP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 HNRNPUQ00839 825 aaKnown RBP eCLIP4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 ZNF252P-AS1Q0IIN9 211 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 SULF2Q8IWU5 870 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 USP26Q9BXU7 913 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 CEP41Q9BYV8 373 aa4.36□□□□□ -1.71
AC009541.1-201ENST00000438279 MSTNO14793 375 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 CTSBP07858 339 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 RLBP1P12271 317 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 UVSSAQ2YD98 709 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 SPOCK3Q9BQ16 436 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 DLGAP3O95886 979 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 LRRC14Q15048 493 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 STK35Q8TDR2 534 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 CYP8B1Q9UNU6 501 aa4.35□□□□□ -1.71
AC009541.1-201ENST00000438279 PAGE1O75459 146 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 TIAF1O95411 115 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 CELA3AP09093 270 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 ZNF157P51786 506 aaPredicted RBP4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 LDLRAD1Q5T700 205 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 MEI1Q5TIA1 1274 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 FAM46AQ96IP4 442 aaKnown RBP4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 MEGF10Q96KG7 1140 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 CYP4F12Q9HCS2 524 aa4.34□□□□□ -1.71
AC009541.1-201ENST00000438279 TRIM37O94972 964 aa4.34□□□□□ -1.72
AC009541.1-201ENST00000438279 ALX3O95076 343 aa4.34□□□□□ -1.72
AC009541.1-201ENST00000438279 CCDC85BQ15834 202 aaPredicted RBP4.34□□□□□ -1.72
AC009541.1-201ENST00000438279 KIF4BQ2VIQ3 1234 aa4.34□□□□□ -1.72
AC009541.1-201ENST00000438279 AGGF1Q8N302 714 aaeCLIP4.34□□□□□ -1.72
AC009541.1-201ENST00000438279 FBXO24O75426 580 aa4.33□□□□□ -1.72
AC009541.1-201ENST00000438279 ECEL1O95672 775 aa4.33□□□□□ -1.72
AC009541.1-201ENST00000438279 NUTM2GQ5VZR2 741 aa4.33□□□□□ -1.72
AC009541.1-201ENST00000438279 PCNX4Q63HM2 1172 aa4.33□□□□□ -1.72
AC009541.1-201ENST00000438279 RSRP1Q9BUV0 290 aa4.33□□□□□ -1.72
AC009541.1-201ENST00000438279 CCDC86Q9H6F5 360 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms