RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 LIN7BQ9HAP6 207 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 SUPT16HQ9Y5B9 1047 aaKnown RBP8.54□□□□□ -1.04
SPEN-202ENST00000438066 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
SPEN-202ENST00000438066 EIF2AK4Q9P2K8 1649 aaKnown RBP8.53□□□□□ -1.04
SPEN-202ENST00000438066 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 MARCH6O60337 910 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 PF4P02776 101 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 CELA3AP09093 270 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 RLBP1P12271 317 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
SPEN-202ENST00000438066 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
SPEN-202ENST00000438066 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 SALL4Q9UJQ4 1053 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 R3HCC1Q9Y3T6 440 aaKnown RBP8.53□□□□□ -1.04
SPEN-202ENST00000438066 KIDINS220Q9ULH0 1771 aa8.53□□□□□ -1.04
SPEN-202ENST00000438066 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 SMPD1P17405 629 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
SPEN-202ENST00000438066 APOBRQ0VD83 1088 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 SNAP47Q5SQN1 464 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 CCDC81Q6ZN84 652 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 HPS1Q92902 700 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 DEPDC7Q96QD5 511 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 KDM5CP41229 1560 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 MAP3K4Q9Y6R4 1608 aa8.52□□□□□ -1.05
SPEN-202ENST00000438066 ENPP3O14638 875 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 BMP2P12643 396 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 LIG3P49916 1009 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 KCNQ5Q9NR82 932 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 GREM1O60565 184 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 MMP20O60882 483 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 GARTP22102 1010 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 CRKP46108 304 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
SPEN-202ENST00000438066 COL9A2Q14055 689 aaPredicted RBP8.51□□□□□ -1.05
SPEN-202ENST00000438066 RASA3Q14644 834 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 PCNX4Q63HM2 1172 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 FILIP1Q7Z7B0 1213 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 TCF12Q99081 682 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
SPEN-202ENST00000438066 ZNF518AQ6AHZ1 1483 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 VWDEQ8N2E2 1590 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 POLR1AO95602 1720 aaPredicted RBP8.5□□□□□ -1.05
SPEN-202ENST00000438066 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 ANAPC15P60006 121 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 OR13H1Q8NG92 308 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 SRRTQ9BXP5 876 aaKnown RBP8.5□□□□□ -1.05
SPEN-202ENST00000438066 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 PPT2Q9UMR5 302 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
SPEN-202ENST00000438066 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
SPEN-202ENST00000438066 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 PRDM15P57071 1507 aaPredicted RBP8.5□□□□□ -1.05
SPEN-202ENST00000438066 MROH1Q8NDA8 1641 aa8.5□□□□□ -1.05
SPEN-202ENST00000438066 ACPPP15309 386 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 NCAPG2Q86XI2 1143 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 NKD1Q969G9 470 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
SPEN-202ENST00000438066 ZKSCAN3Q9BRR0 538 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 IFT57Q9NWB7 429 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 CD109Q6YHK3 1445 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 ATP10AO60312 1499 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 GLI2P10070 1586 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 E9PCH4 1651 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 TET3O43151 1660 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
SPEN-202ENST00000438066 TRPA1O75762 1119 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 NOL8Q76FK4 1167 aaKnown RBP8.49□□□□□ -1.05
SPEN-202ENST00000438066 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
SPEN-202ENST00000438066 OSMRQ99650 979 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
SPEN-202ENST00000438066 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 NEO1Q92859 1461 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 RICTORQ6R327 1708 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 RNF17Q9BXT8 1623 aaKnown RBP8.48□□□□□ -1.05
SPEN-202ENST00000438066 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
SPEN-202ENST00000438066 GDF9O60383 454 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 RARAP10276 462 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 GRIA4P48058 902 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 TTBK2Q6IQ55 1244 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 AFAP1Q8N556 730 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 SHDQ96IW2 340 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 CNTNAP3BQ96NU0 1288 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 CNTNAP3Q9BZ76 1288 aa8.48□□□□□ -1.05
SPEN-202ENST00000438066 CRISPLD1Q9H336 500 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms