RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FAM9BQ8IZU0 186 aa9.81□□□□□ -0.84
VPS50-203ENST00000436177 PLIN1O60240 522 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 VAMP4O75379 141 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 KLRK1P26718 216 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 CASP7P55210 303 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 LMBR1LQ6UX01 489 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 LDHAL6AQ6ZMR3 332 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 TXNRD3Q86VQ6 643 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 HELBQ8NG08 1087 aaPredicted RBP9.8□□□□□ -0.84
VPS50-203ENST00000436177 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 CD209Q9NNX6 404 aa9.8□□□□□ -0.84
VPS50-203ENST00000436177 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
VPS50-203ENST00000436177 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
VPS50-203ENST00000436177 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
VPS50-203ENST00000436177 TAF5LO75529 589 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 RBM5P52756 815 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS50-203ENST00000436177 PRKG1Q13976 671 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 BEND3Q5T5X7 828 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 CTU1Q7Z7A3 348 aaKnown RBP9.79□□□□□ -0.84
VPS50-203ENST00000436177 SRCIN1Q9C0H9 1055 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
VPS50-203ENST00000436177 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
VPS50-203ENST00000436177 COL1A1P02452 1464 aaPredicted RBP9.79□□□□□ -0.84
VPS50-203ENST00000436177 ALDH1L1O75891 902 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 VPS37DQ86XT2 251 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 DEFB129Q9H1M3 183 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 VEZTQ9HBM0 779 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 ANGEL1Q9UNK9 670 aaKnown RBP9.78□□□□□ -0.84
VPS50-203ENST00000436177 PPP2R3BQ9Y5P8 575 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 MYH3P11055 1940 aa9.78□□□□□ -0.84
VPS50-203ENST00000436177 FRAT2O75474 233 aaPredicted RBP9.77□□□□□ -0.85
VPS50-203ENST00000436177 FOXO4P98177 505 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 TNFAIP1Q13829 316 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 ARSIQ5FYB1 569 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 C15orf52Q6ZUT6 534 aaKnown RBP9.77□□□□□ -0.85
VPS50-203ENST00000436177 SPEF2Q9C093 1822 aa9.77□□□□□ -0.85
VPS50-203ENST00000436177 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 CLRN2A0PK11 232 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 SNAP23O00161 211 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 IL1R1P14778 569 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
VPS50-203ENST00000436177 FKBP1AP62942 108 aaKnown RBP9.76□□□□□ -0.85
VPS50-203ENST00000436177 PTPN12Q05209 780 aaKnown RBP9.76□□□□□ -0.85
VPS50-203ENST00000436177 PKN2Q16513 984 aaKnown RBP9.76□□□□□ -0.85
VPS50-203ENST00000436177 CFAP100Q494V2 611 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 MFSD14BQ5SR56 506 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 ZNF594Q96JF6 807 aaPredicted RBP9.76□□□□□ -0.85
VPS50-203ENST00000436177 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 PSME4Q14997 1843 aa9.76□□□□□ -0.85
VPS50-203ENST00000436177 PDE4DIPQ5VU43 2346 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
VPS50-203ENST00000436177 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
VPS50-203ENST00000436177 RGS19P49795 217 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 SOX10P56693 466 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 UBE4AQ14139 1066 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 CERS5Q8N5B7 392 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
VPS50-203ENST00000436177 KHSRPQ92945 711 aaKnown RBP eCLIP9.75□□□□□ -0.852e-7■■■■□ 23.4
VPS50-203ENST00000436177 ZBED3Q96IU2 234 aaPredicted RBP9.75□□□□□ -0.85
VPS50-203ENST00000436177 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 MROH5Q6ZUA9 1318 aa9.75□□□□□ -0.85
VPS50-203ENST00000436177 GPR25O00155 361 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 STK25O00506 426 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 GYG1P46976 350 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 INHBEP58166 350 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 CAVIN4Q5BKX8 364 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 METTL24Q5JXM2 366 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 FBXO22Q8NEZ5 403 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 TMOD2Q9NZR1 351 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 TTF2Q9UNY4 1162 aaKnown RBP9.74□□□□□ -0.85
VPS50-203ENST00000436177 PTPRCP08575 1304 aa9.74□□□□□ -0.85
VPS50-203ENST00000436177 POLR2AP24928 1970 aaKnown RBP9.74□□□□□ -0.85
VPS50-203ENST00000436177 E9PSI1 815 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 FKTNO75072 461 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 ZBTB48P10074 688 aaPredicted RBP9.73□□□□□ -0.85
VPS50-203ENST00000436177 TM4SF4P48230 202 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 TNNI2P48788 182 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
VPS50-203ENST00000436177 RASA3Q14644 834 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
VPS50-203ENST00000436177 LDLRAD1Q5T700 205 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 SUCLG2Q96I99 432 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
VPS50-203ENST00000436177 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 FAM205AQ6ZU69 1335 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 IRS2Q9Y4H2 1338 aa9.73□□□□□ -0.85
VPS50-203ENST00000436177 UNCXA6NJT0 531 aa9.72□□□□□ -0.85
VPS50-203ENST00000436177 WDHD1O75717 1129 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms