RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 TDRD3Q9H7E2 651 aaKnown RBP21.56■■□□□ 1.04
SREBF2-203ENST00000435061 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
SREBF2-203ENST00000435061 ECM29Q5VYK3 1845 aa21.55■■□□□ 1.04
SREBF2-203ENST00000435061 NBPF12Q5TAG4 269 aaPredicted RBP21.55■■□□□ 1.04
SREBF2-203ENST00000435061 SSC5DA1L4H1 1573 aa21.54■■□□□ 1.04
SREBF2-203ENST00000435061 IREB2P48200 963 aaKnown RBP21.54■■□□□ 1.04
SREBF2-203ENST00000435061 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
SREBF2-203ENST00000435061 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
SREBF2-203ENST00000435061 TEKT1Q969V4 418 aa21.54■■□□□ 1.04
SREBF2-203ENST00000435061 CEP126Q9P2H0 1117 aa21.54■■□□□ 1.04
SREBF2-203ENST00000435061 FZD1Q9UP38 647 aa21.54■■□□□ 1.04
SREBF2-203ENST00000435061 LRRFIP2Q9Y608 721 aaKnown RBP21.54■■□□□ 1.04
SREBF2-203ENST00000435061 IPO8O15397 1037 aaKnown RBP21.53■■□□□ 1.04
SREBF2-203ENST00000435061 ZBTB48P10074 688 aaPredicted RBP21.53■■□□□ 1.04
SREBF2-203ENST00000435061 TNNI2P48788 182 aa21.53■■□□□ 1.04
SREBF2-203ENST00000435061 INHBEP58166 350 aa21.53■■□□□ 1.04
SREBF2-203ENST00000435061 GRIK5Q16478 980 aa21.53■■□□□ 1.04
SREBF2-203ENST00000435061 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
SREBF2-203ENST00000435061 MAST3O60307 1309 aa21.53■■□□□ 1.04
SREBF2-203ENST00000435061 MANSC4A6NHS7 340 aaPredicted RBP21.52■■□□□ 1.04
SREBF2-203ENST00000435061 USP2O75604 605 aaPredicted RBP21.52■■□□□ 1.04
SREBF2-203ENST00000435061 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.04
SREBF2-203ENST00000435061 WDR66Q8TBY9 1149 aa21.52■■□□□ 1.04
SREBF2-203ENST00000435061 ZDHHC15Q96MV8 337 aa21.52■■□□□ 1.04
SREBF2-203ENST00000435061 CFHR5Q9BXR6 569 aa21.52■■□□□ 1.04
SREBF2-203ENST00000435061 SIL1Q9H173 461 aa21.52■■□□□ 1.04
SREBF2-203ENST00000435061 TBC1D8O95759 1140 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 ALDH1A1P00352 501 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 GNAI3P08754 354 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 CTU1Q7Z7A3 348 aaKnown RBP21.51■■□□□ 1.03
SREBF2-203ENST00000435061 ANKRD13AQ8IZ07 590 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 MEIS3Q99687 375 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 ARAP2Q8WZ64 1704 aa21.51■■□□□ 1.03
SREBF2-203ENST00000435061 TCP10L2B9ZVM9 353 aa21.5■■□□□ 1.03
SREBF2-203ENST00000435061 ATP2B3Q16720 1220 aa21.5■■□□□ 1.03
SREBF2-203ENST00000435061 WNK4Q96J92 1243 aa21.5■■□□□ 1.03
SREBF2-203ENST00000435061 CLMNQ96JQ2 1002 aa21.5■■□□□ 1.03
SREBF2-203ENST00000435061 TEPSINQ96N21 525 aa21.5■■□□□ 1.03
SREBF2-203ENST00000435061 GNL3LQ9NVN8 582 aaKnown RBP21.5■■□□□ 1.03
SREBF2-203ENST00000435061 HHIPL2Q6UWX4 724 aa21.49■■□□□ 1.03
SREBF2-203ENST00000435061 GPR25O00155 361 aa21.48■■□□□ 1.03
SREBF2-203ENST00000435061 RGS19P49795 217 aa21.48■■□□□ 1.03
SREBF2-203ENST00000435061 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
SREBF2-203ENST00000435061 APOBEC3HQ6NTF7 200 aaKnown RBP21.48■■□□□ 1.03
SREBF2-203ENST00000435061 ZNF296Q8WUU4 475 aaPredicted RBP21.48■■□□□ 1.03
SREBF2-203ENST00000435061 TMEM39BQ9GZU3 492 aa21.48■■□□□ 1.03
SREBF2-203ENST00000435061 TMOD2Q9NZR1 351 aa21.48■■□□□ 1.03
SREBF2-203ENST00000435061 ZBTB22O15209 634 aa21.47■■□□□ 1.03
SREBF2-203ENST00000435061 PKN2Q16513 984 aaKnown RBP21.47■■□□□ 1.03
SREBF2-203ENST00000435061 ATF7IPQ6VMQ6 1270 aa21.47■■□□□ 1.03
SREBF2-203ENST00000435061 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
SREBF2-203ENST00000435061 IFNL1Q8IU54 200 aa21.47■■□□□ 1.03
SREBF2-203ENST00000435061 PA2G4Q9UQ80 394 aaKnown RBP21.47■■□□□ 1.03
SREBF2-203ENST00000435061 SEMA3EO15041 775 aa21.46■■□□□ 1.03
SREBF2-203ENST00000435061 TRIM27P14373 513 aa21.46■■□□□ 1.03
SREBF2-203ENST00000435061 MTX1Q13505 466 aa21.46■■□□□ 1.03
SREBF2-203ENST00000435061 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.46■■□□□ 1.03
SREBF2-203ENST00000435061 SRGAP3O43295 1099 aa21.45■■□□□ 1.02
SREBF2-203ENST00000435061 CDAN1Q8IWY9 1227 aa21.45■■□□□ 1.02
SREBF2-203ENST00000435061 HOOK2Q96ED9 719 aa21.45■■□□□ 1.02
SREBF2-203ENST00000435061 DENND2AQ9ULE3 1009 aa21.45■■□□□ 1.02
SREBF2-203ENST00000435061 BCAR3O75815 825 aa21.44■■□□□ 1.02
SREBF2-203ENST00000435061 CACNB3P54284 484 aa21.44■■□□□ 1.02
SREBF2-203ENST00000435061 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
SREBF2-203ENST00000435061 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
SREBF2-203ENST00000435061 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
SREBF2-203ENST00000435061 SALL1Q9NSC2 1324 aa21.44■■□□□ 1.02
SREBF2-203ENST00000435061 TESPA1A2RU30 521 aaPredicted RBP21.43■■□□□ 1.02
SREBF2-203ENST00000435061 FKTNO75072 461 aa21.43■■□□□ 1.02
SREBF2-203ENST00000435061 GJA5P36382 358 aa21.43■■□□□ 1.02
SREBF2-203ENST00000435061 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.43■■□□□ 1.02
SREBF2-203ENST00000435061 MIER1Q8N108 512 aa21.43■■□□□ 1.02
SREBF2-203ENST00000435061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.43■■□□□ 1.02
SREBF2-203ENST00000435061 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
SREBF2-203ENST00000435061 IGF2BP3O00425 579 aaKnown RBP eCLIP21.42■■□□□ 1.02
SREBF2-203ENST00000435061 GNAI2P04899 355 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
SREBF2-203ENST00000435061 PHKA1P46020 1223 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
SREBF2-203ENST00000435061 OPTNQ96CV9 577 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 R3HDMLQ9H3Y0 253 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 ELP3Q9H9T3 547 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 CSADQ9Y600 493 aa21.42■■□□□ 1.02
SREBF2-203ENST00000435061 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
SREBF2-203ENST00000435061 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
SREBF2-203ENST00000435061 VGLL4Q14135 290 aa21.41■■□□□ 1.02
SREBF2-203ENST00000435061 CCDC102BQ68D86 513 aa21.41■■□□□ 1.02
SREBF2-203ENST00000435061 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
SREBF2-203ENST00000435061 DAGLAQ9Y4D2 1042 aa21.41■■□□□ 1.02
SREBF2-203ENST00000435061 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
SREBF2-203ENST00000435061 PRDX5P30044 214 aa21.4■■□□□ 1.02
SREBF2-203ENST00000435061 ADORA1P30542 326 aa21.4■■□□□ 1.02
SREBF2-203ENST00000435061 TIMM10P62072 90 aa21.4■■□□□ 1.02
SREBF2-203ENST00000435061 ZKSCAN2Q63HK3 967 aa21.4■■□□□ 1.02
SREBF2-203ENST00000435061 PDS5AQ29RF7 1337 aaKnown RBP21.39■■□□□ 1.01
SREBF2-203ENST00000435061 DIXDC1Q155Q3 683 aa21.39■■□□□ 1.01
SREBF2-203ENST00000435061 DCAF15Q66K64 600 aa21.39■■□□□ 1.01
SREBF2-203ENST00000435061 FAM151AQ8WW52 585 aa21.39■■□□□ 1.01
SREBF2-203ENST00000435061 CLUAP1Q96AJ1 413 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms