RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SPDYE6P0CI01 402 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 FMR1Q06787 632 aaKnown RBP eCLIP22.58■■□□□ 1.21
HLA-F-220ENST00000434407 USP48Q86UV5 1035 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 DCTPP1Q9H773 170 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 CREBZFQ9NS37 354 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 PCDHAC2Q9Y5I4 1007 aa22.58■■□□□ 1.21
HLA-F-220ENST00000434407 PRMT6Q96LA8 375 aaPredicted RBP22.57■■□□□ 1.2
HLA-F-220ENST00000434407 CCDC8Q9H0W5 538 aaPredicted RBP22.57■■□□□ 1.2
HLA-F-220ENST00000434407 TLR7Q9NYK1 1049 aaKnown RBP22.57■■□□□ 1.2
HLA-F-220ENST00000434407 HMG20BQ9P0W2 317 aa22.57■■□□□ 1.2
HLA-F-220ENST00000434407 MAST3O60307 1309 aa22.57■■□□□ 1.2
HLA-F-220ENST00000434407 MCAMP43121 646 aa22.56■■□□□ 1.2
HLA-F-220ENST00000434407 CRKP46108 304 aa22.56■■□□□ 1.2
HLA-F-220ENST00000434407 CST9Q5W186 159 aa22.56■■□□□ 1.2
HLA-F-220ENST00000434407 ZGPATQ8N5A5 531 aaKnown RBP22.56■■□□□ 1.2
HLA-F-220ENST00000434407 IL1RAPL2Q9NP60 686 aa22.56■■□□□ 1.2
HLA-F-220ENST00000434407 MYH2Q9UKX2 1941 aa22.56■■□□□ 1.2
HLA-F-220ENST00000434407 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 PRDX5P30044 214 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 CCDC158Q5M9N0 1113 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 HHIPL2Q6UWX4 724 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 AACSQ86V21 672 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 SULF1Q8IWU6 871 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 CLASRPQ8N2M8 674 aaKnown RBP22.55■■□□□ 1.2
HLA-F-220ENST00000434407 SPATA5Q8NB90 893 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 AOX1Q06278 1338 aa22.55■■□□□ 1.2
HLA-F-220ENST00000434407 ADM5C9JUS6 153 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 HTRA3P83110 453 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 PI16Q6UXB8 463 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 TEKT1Q969V4 418 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 ZDHHC15Q96MV8 337 aa22.54■■□□□ 1.2
HLA-F-220ENST00000434407 MYO5AQ9Y4I1 1855 aaKnown RBP22.54■■□□□ 1.2
HLA-F-220ENST00000434407 APBB1O00213 710 aa22.53■■□□□ 1.2
HLA-F-220ENST00000434407 LDHBP07195 334 aaKnown RBP22.53■■□□□ 1.2
HLA-F-220ENST00000434407 TTC39AQ5SRH9 613 aa22.53■■□□□ 1.2
HLA-F-220ENST00000434407 DLK2Q6UY11 383 aa22.53■■□□□ 1.2
HLA-F-220ENST00000434407 RBM5P52756 815 aaKnown RBP eCLIP22.52■■□□□ 1.2
HLA-F-220ENST00000434407 APOBEC3FQ8IUX4 373 aaKnown RBP22.52■■□□□ 1.2
HLA-F-220ENST00000434407 LRRCC1Q9C099 1032 aa22.52■■□□□ 1.2
HLA-F-220ENST00000434407 MYO1BO43795 1136 aa22.51■■□□□ 1.19
HLA-F-220ENST00000434407 CELF2O95319 508 aaKnown RBP22.51■■□□□ 1.19
HLA-F-220ENST00000434407 SPDYE2Q495Y8 402 aa22.51■■□□□ 1.19
HLA-F-220ENST00000434407 SPTY2D1Q68D10 685 aaPredicted RBP22.51■■□□□ 1.19
HLA-F-220ENST00000434407 APOBEC3HQ6NTF7 200 aaKnown RBP22.51■■□□□ 1.19
HLA-F-220ENST00000434407 EXOC6Q8TAG9 804 aa22.51■■□□□ 1.19
HLA-F-220ENST00000434407 PCNTO95613 3336 aa22.5■■□□□ 1.19
HLA-F-220ENST00000434407 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
HLA-F-220ENST00000434407 ZNF70Q9UC06 446 aaPredicted RBP22.5■■□□□ 1.19
HLA-F-220ENST00000434407 CDCA5Q96FF9 252 aa22.49■■□□□ 1.19
HLA-F-220ENST00000434407 FAM163AQ96GL9 167 aaPredicted RBP22.49■■□□□ 1.19
HLA-F-220ENST00000434407 TDRD3Q9H7E2 651 aaKnown RBP22.49■■□□□ 1.19
HLA-F-220ENST00000434407 ABCF2Q9UG63 623 aa22.49■■□□□ 1.19
HLA-F-220ENST00000434407 SCAF8Q9UPN6 1271 aaKnown RBP22.49■■□□□ 1.19
HLA-F-220ENST00000434407 DAGLAQ9Y4D2 1042 aa22.49■■□□□ 1.19
HLA-F-220ENST00000434407 CLRN2A0PK11 232 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 CYP2E1P05181 493 aaPredicted RBP22.48■■□□□ 1.19
HLA-F-220ENST00000434407 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
HLA-F-220ENST00000434407 DIXDC1Q155Q3 683 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 ZNF384Q8TF68 577 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 GAKO14976 1311 aa22.48■■□□□ 1.19
HLA-F-220ENST00000434407 SMARCA5O60264 1052 aaPredicted RBP22.47■■□□□ 1.19
HLA-F-220ENST00000434407 IGSF3O75054 1194 aa22.47■■□□□ 1.19
HLA-F-220ENST00000434407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.47■■□□□ 1.19
HLA-F-220ENST00000434407 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
HLA-F-220ENST00000434407 PPP2R3BQ9Y5P8 575 aa22.47■■□□□ 1.19
HLA-F-220ENST00000434407 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
HLA-F-220ENST00000434407 DOCK2Q92608 1830 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 RASSF10A6NK89 507 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 ZAP70P43403 619 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 MECOMQ03112 1051 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 FKBP1CQ5VVH2 108 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 NSUN4Q96CB9 384 aaKnown RBP22.46■■□□□ 1.19
HLA-F-220ENST00000434407 KLRG1Q96E93 195 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 CNTNAP1P78357 1384 aa22.46■■□□□ 1.19
HLA-F-220ENST00000434407 SAPCD2Q86UD0 394 aa22.45■■□□□ 1.18
HLA-F-220ENST00000434407 DZIP1Q86YF9 867 aaKnown RBP22.45■■□□□ 1.18
HLA-F-220ENST00000434407 SLF2Q8IX21 1173 aa22.45■■□□□ 1.18
HLA-F-220ENST00000434407 ZNF408Q9H9D4 720 aa22.45■■□□□ 1.18
HLA-F-220ENST00000434407 VEZTQ9HBM0 779 aa22.45■■□□□ 1.18
HLA-F-220ENST00000434407 MAST2Q6P0Q8 1798 aa22.45■■□□□ 1.18
HLA-F-220ENST00000434407 TNFAIP1Q13829 316 aa22.44■■□□□ 1.18
HLA-F-220ENST00000434407 PRAMEF18Q5VWM3 479 aa22.44■■□□□ 1.18
HLA-F-220ENST00000434407 HHIPL1Q96JK4 782 aa22.44■■□□□ 1.18
HLA-F-220ENST00000434407 PAPPA2Q9BXP8 1791 aa22.44■■□□□ 1.18
HLA-F-220ENST00000434407 GBA2Q9HCG7 927 aaPredicted RBP22.44■■□□□ 1.18
HLA-F-220ENST00000434407 CDC42EP5Q6NZY7 148 aa22.43■■□□□ 1.18
HLA-F-220ENST00000434407 GCC1Q96CN9 775 aa22.43■■□□□ 1.18
HLA-F-220ENST00000434407 PIH1D3Q9NQM4 214 aaKnown RBP22.43■■□□□ 1.18
HLA-F-220ENST00000434407 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
HLA-F-220ENST00000434407 ABT1Q9ULW3 272 aaKnown RBP22.43■■□□□ 1.18
HLA-F-220ENST00000434407 MROH7-TTC4A0A0A0MT08 1334 aa22.42■■□□□ 1.18
HLA-F-220ENST00000434407 ATP5JP18859 108 aa22.42■■□□□ 1.18
HLA-F-220ENST00000434407 FKBP1BP68106 108 aa22.42■■□□□ 1.18
HLA-F-220ENST00000434407 RASA3Q14644 834 aa22.42■■□□□ 1.18
HLA-F-220ENST00000434407 DEFB115Q30KQ5 88 aa22.42■■□□□ 1.18
HLA-F-220ENST00000434407 C2orf69Q8N8R5 385 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms