RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TNFAIP1Q13829 316 aa27.3■■□□□ 1.96
RPUSD3-206ENST00000433535 ZNF296Q8WUU4 475 aaPredicted RBP27.3■■□□□ 1.96
RPUSD3-206ENST00000433535 TCP10L2B9ZVM9 353 aa27.29■■□□□ 1.96
RPUSD3-206ENST00000433535 IFIT1P09914 478 aaKnown RBP27.29■■□□□ 1.96
RPUSD3-206ENST00000433535 TBC1D22AQ8WUA7 517 aa27.29■■□□□ 1.96
RPUSD3-206ENST00000433535 WNK4Q96J92 1243 aa27.29■■□□□ 1.96
RPUSD3-206ENST00000433535 IREB2P48200 963 aaKnown RBP27.28■■□□□ 1.96
RPUSD3-206ENST00000433535 SIL1Q9H173 461 aa27.28■■□□□ 1.96
RPUSD3-206ENST00000433535 KIF16BQ96L93 1317 aa27.27■■□□□ 1.96
RPUSD3-206ENST00000433535 USP2O75604 605 aaPredicted RBP27.27■■□□□ 1.96
RPUSD3-206ENST00000433535 ATG9AQ7Z3C6 839 aa27.27■■□□□ 1.96
RPUSD3-206ENST00000433535 API5Q9BZZ5 524 aaKnown RBP27.27■■□□□ 1.96
RPUSD3-206ENST00000433535 R3HDMLQ9H3Y0 253 aa27.27■■□□□ 1.96
RPUSD3-206ENST00000433535 GPR25O00155 361 aa27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 ZBTB48P10074 688 aaPredicted RBP27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 SLC5A1P13866 664 aa27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 RGS19P49795 217 aa27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 TEPSINQ96N21 525 aa27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 TMEM39BQ9GZU3 492 aa27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 LRRFIP2Q9Y608 721 aaKnown RBP27.26■■□□□ 1.95
RPUSD3-206ENST00000433535 MANSC4A6NHS7 340 aaPredicted RBP27.25■■□□□ 1.95
RPUSD3-206ENST00000433535 CACNB3P54284 484 aa27.25■■□□□ 1.95
RPUSD3-206ENST00000433535 MLLT1Q03111 559 aaPredicted RBP27.25■■□□□ 1.95
RPUSD3-206ENST00000433535 LPIN2Q92539 896 aa27.25■■□□□ 1.95
RPUSD3-206ENST00000433535 TEKT1Q969V4 418 aa27.25■■□□□ 1.95
RPUSD3-206ENST00000433535 GJA5P36382 358 aa27.24■■□□□ 1.95
RPUSD3-206ENST00000433535 RARSP54136 660 aaKnown RBP27.24■■□□□ 1.95
RPUSD3-206ENST00000433535 HDLBPQ00341 1268 aaKnown RBP27.24■■□□□ 1.95
RPUSD3-206ENST00000433535 ANKRD13AQ8IZ07 590 aa27.24■■□□□ 1.95
RPUSD3-206ENST00000433535 MEIS3Q99687 375 aa27.24■■□□□ 1.95
RPUSD3-206ENST00000433535 IFNL1Q8IU54 200 aa27.23■■□□□ 1.95
RPUSD3-206ENST00000433535 CFHR5Q9BXR6 569 aa27.23■■□□□ 1.95
RPUSD3-206ENST00000433535 UNCXA6NJT0 531 aa27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 IGF2BP3O00425 579 aaKnown RBP eCLIP27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 TNNI2P48788 182 aa27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 NOM1Q5C9Z4 860 aaKnown RBP27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 ELP3Q9H9T3 547 aa27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 PA2G4Q9UQ80 394 aaKnown RBP27.22■■□□□ 1.95
RPUSD3-206ENST00000433535 MAST3O60307 1309 aa27.21■■□□□ 1.95
RPUSD3-206ENST00000433535 CIAO1O76071 339 aa27.21■■□□□ 1.95
RPUSD3-206ENST00000433535 SOX10P56693 466 aa27.21■■□□□ 1.95
RPUSD3-206ENST00000433535 ZDHHC15Q96MV8 337 aa27.21■■□□□ 1.95
RPUSD3-206ENST00000433535 ALDH1A1P00352 501 aa27.2■■□□□ 1.94
RPUSD3-206ENST00000433535 ATP2B3Q16720 1220 aa27.2■■□□□ 1.94
RPUSD3-206ENST00000433535 FKTNO75072 461 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 INHBEP58166 350 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 APOBEC3HQ6NTF7 200 aaKnown RBP27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 OPTNQ96CV9 577 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 FBXO3Q9UK99 471 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 HPS5Q9UPZ3 1129 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 SUGT1Q9Y2Z0 365 aa27.19■■□□□ 1.94
RPUSD3-206ENST00000433535 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.18■■□□□ 1.94
RPUSD3-206ENST00000433535 CNKSR2Q8WXI2 1034 aa27.18■■□□□ 1.94
RPUSD3-206ENST00000433535 TMOD2Q9NZR1 351 aa27.18■■□□□ 1.94
RPUSD3-206ENST00000433535 CEP126Q9P2H0 1117 aa27.18■■□□□ 1.94
RPUSD3-206ENST00000433535 VGLL4Q14135 290 aa27.17■■□□□ 1.94
RPUSD3-206ENST00000433535 WDR66Q8TBY9 1149 aa27.17■■□□□ 1.94
RPUSD3-206ENST00000433535 PKN2Q16513 984 aaKnown RBP27.16■■□□□ 1.94
RPUSD3-206ENST00000433535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.16■■□□□ 1.94
RPUSD3-206ENST00000433535 MRIQ9BWK5 157 aa27.16■■□□□ 1.94
RPUSD3-206ENST00000433535 IL15P40933 162 aaPredicted RBP27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 DIXDC1Q155Q3 683 aa27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 INTS3Q68E01 1043 aaKnown RBP27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 HHIPL2Q6UWX4 724 aa27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 ARHGAP45Q92619 1136 aa27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 HDAC5Q9UQL6 1122 aa27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 TNNQ9UQP3 1299 aa27.15■■□□□ 1.94
RPUSD3-206ENST00000433535 PRDX5P30044 214 aa27.14■■□□□ 1.94
RPUSD3-206ENST00000433535 PHKA1P46020 1223 aa27.14■■□□□ 1.94
RPUSD3-206ENST00000433535 PTPN18Q99952 460 aa27.14■■□□□ 1.94
RPUSD3-206ENST00000433535 COPRSQ9NQ92 184 aa27.14■■□□□ 1.94
RPUSD3-206ENST00000433535 ADORA1P30542 326 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 MAP3K9P80192 1104 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 CRHR2Q13324 411 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 FAM83AQ86UY5 434 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 DAGLAQ9Y4D2 1042 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 CSADQ9Y600 493 aa27.13■■□□□ 1.93
RPUSD3-206ENST00000433535 RPAP1Q9BWH6 1393 aaPredicted RBP27.12■■□□□ 1.93
RPUSD3-206ENST00000433535 TRIM27P14373 513 aa27.12■■□□□ 1.93
RPUSD3-206ENST00000433535 OTUD5Q96G74 571 aa27.12■■□□□ 1.93
RPUSD3-206ENST00000433535 MS4A4AQ96JQ5 239 aa27.12■■□□□ 1.93
RPUSD3-206ENST00000433535 GNL3LQ9NVN8 582 aaKnown RBP27.12■■□□□ 1.93
RPUSD3-206ENST00000433535 TESPA1A2RU30 521 aaPredicted RBP27.11■■□□□ 1.93
RPUSD3-206ENST00000433535 FKBP1CQ5VVH2 108 aa27.11■■□□□ 1.93
RPUSD3-206ENST00000433535 OTUD7BQ6GQQ9 843 aa27.11■■□□□ 1.93
RPUSD3-206ENST00000433535 FBXO46Q6PJ61 603 aaPredicted RBP27.11■■□□□ 1.93
RPUSD3-206ENST00000433535 WRNIP1Q96S55 665 aa27.11■■□□□ 1.93
RPUSD3-206ENST00000433535 SRGAP3O43295 1099 aa27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 BCAR3O75815 825 aa27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 GNAI3P08754 354 aa27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 DIEXFQ68CQ4 756 aaKnown RBP27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 FRAT1Q92837 279 aaPredicted RBP27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 SNCAIPQ9Y6H5 919 aa27.1■■□□□ 1.93
RPUSD3-206ENST00000433535 LDHBP07195 334 aaKnown RBP27.09■■□□□ 1.93
RPUSD3-206ENST00000433535 CCDC102BQ68D86 513 aa27.09■■□□□ 1.93
RPUSD3-206ENST00000433535 BRI3BPQ8WY22 251 aa27.09■■□□□ 1.93
RPUSD3-206ENST00000433535 DENND2AQ9ULE3 1009 aa27.09■■□□□ 1.93
RPUSD3-206ENST00000433535 TRIM17Q9Y577 477 aa27.09■■□□□ 1.93
RPUSD3-206ENST00000433535 CCL15-CCL14A0A0B4J2E2 113 aa27.08■■□□□ 1.93
RPUSD3-206ENST00000433535 TCP10Q12799 353 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms