RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ANKRD2Q9GZV1 360 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 ANTXR2P58335 489 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 PRR5LQ6MZQ0 368 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 LCORLQ8N3X6 602 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 RBM27Q9P2N5 1060 aaKnown RBP23.1■■□□□ 1.29
VRK2-205ENST00000432057 ABCF2Q9UG63 623 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 NAP1L2Q9ULW6 460 aaPredicted RBP23.1■■□□□ 1.29
VRK2-205ENST00000432057 ATP6V1DQ9Y5K8 247 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 ZMYM6O95789 1325 aa23.1■■□□□ 1.29
VRK2-205ENST00000432057 BAZ2AQ9UIF9 1905 aaKnown RBP23.1■■□□□ 1.29
VRK2-205ENST00000432057 RXRBP28702 533 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 MCM5P33992 734 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 USP48Q86UV5 1035 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 SLC51AQ86UW1 340 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 PATL2C9JE40 543 aaKnown RBP23.09■■□□□ 1.29
VRK2-205ENST00000432057 CCT2P78371 535 aaKnown RBP23.09■■□□□ 1.29
VRK2-205ENST00000432057 ALX1Q15699 326 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 FBXO33Q7Z6M2 555 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 FBXL16Q8N461 479 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 DENND2AQ9ULE3 1009 aa23.09■■□□□ 1.29
VRK2-205ENST00000432057 MBD3O95983 291 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 GAS2L3Q86XJ1 694 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 MIGA1Q8NAN2 632 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 TMEM87AQ8NBN3 555 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
VRK2-205ENST00000432057 SMARCC2Q8TAQ2 1214 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 DDX11Q96FC9 970 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 TFCP2L1Q9NZI6 479 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 RAI14Q9P0K7 980 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
VRK2-205ENST00000432057 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 PRKAB2O43741 272 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 GADD45BO75293 160 aaPredicted RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 CYP7A1P22680 504 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 PDIA3P30101 505 aaKnown RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 ADGRA1Q86SQ6 560 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 ZNF274Q96GC6 653 aaPredicted RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 LLPHQ9BRT6 129 aaKnown RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 NAPBQ9H115 298 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 NCOA5Q9HCD5 579 aaKnown RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 ECM29Q5VYK3 1845 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 GSG1L2A8MUP6 293 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 CTDNEP1O95476 244 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 PDIA4P13667 645 aaKnown RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 GRAPQ13588 217 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 FERMT3Q86UX7 667 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
VRK2-205ENST00000432057 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
VRK2-205ENST00000432057 ANKRD31Q8N7Z5 1873 aa23.06■■□□□ 1.28
VRK2-205ENST00000432057 WDR19Q8NEZ3 1342 aa23.06■■□□□ 1.28
VRK2-205ENST00000432057 DNM1Q05193 864 aaKnown RBP23.06■■□□□ 1.28
VRK2-205ENST00000432057 ZSCAN23Q3MJ62 389 aa23.06■■□□□ 1.28
VRK2-205ENST00000432057 PROM2Q8N271 834 aa23.06■■□□□ 1.28
VRK2-205ENST00000432057 SLC4A4Q9Y6R1 1079 aa23.06■■□□□ 1.28
VRK2-205ENST00000432057 NEDD4P46934 1319 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 FIBPO43427 364 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 EVCP57679 992 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 TRDNQ13061 729 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 PTPDC1A2A3K4 754 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 SEMA3EO15041 775 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 SERPINB2P05120 415 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 GNAT2P19087 354 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 CYB5R4Q7L1T6 521 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 TMEM63CQ9P1W3 806 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 RGS17Q9UGC6 210 aaPredicted RBP23.05■■□□□ 1.28
VRK2-205ENST00000432057 BRPF3Q9ULD4 1205 aa23.05■■□□□ 1.28
VRK2-205ENST00000432057 ISY1Q9ULR0 285 aaKnown RBP23.05■■□□□ 1.28
VRK2-205ENST00000432057 LAMB1P07942 1786 aa23.04■■□□□ 1.28
VRK2-205ENST00000432057 IRS2Q9Y4H2 1338 aa23.04■■□□□ 1.28
VRK2-205ENST00000432057 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
VRK2-205ENST00000432057 HIBADHP31937 336 aaKnown RBP23.04■■□□□ 1.28
VRK2-205ENST00000432057 CTDSPL2Q05D32 466 aa23.04■■□□□ 1.28
VRK2-205ENST00000432057 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
VRK2-205ENST00000432057 KLF18A0A0U1RQI7 1052 aa23.03■■□□□ 1.28
VRK2-205ENST00000432057 ST5P78524 1137 aa23.03■■□□□ 1.28
VRK2-205ENST00000432057 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
VRK2-205ENST00000432057 FAM184AQ8NB25 1140 aa23.03■■□□□ 1.28
VRK2-205ENST00000432057 SALL1Q9NSC2 1324 aa23.03■■□□□ 1.28
VRK2-205ENST00000432057 B4E1Z4 1266 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 TDO2P48775 406 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 DDR1Q08345 913 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 RPGRQ92834 1020 aaKnown RBP23.02■■□□□ 1.28
VRK2-205ENST00000432057 GRPEL1Q9HAV7 217 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 PDS5AQ29RF7 1337 aaKnown RBP23.02■■□□□ 1.28
VRK2-205ENST00000432057 MAGEB6P1A0A0J9YX57 407 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 GOLGA8BA8MQT2 603 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 MRE11P49959 708 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 ZNF445P59923 1031 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 ZNF384Q8TF68 577 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 NACAP1Q9BZK3 213 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 INCENPQ9NQS7 918 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 TACC3Q9Y6A5 838 aa23.02■■□□□ 1.28
VRK2-205ENST00000432057 LRRC37AA6NMS7 1700 aa23.01■■□□□ 1.27
VRK2-205ENST00000432057 HMGN5P82970 282 aaKnown RBP23.01■■□□□ 1.27
VRK2-205ENST00000432057 CHAF1AQ13111 956 aaPredicted RBP23.01■■□□□ 1.27
VRK2-205ENST00000432057 FAM173BQ6P4H8 233 aa23.01■■□□□ 1.27
VRK2-205ENST00000432057 RAB11FIP4Q86YS3 637 aa23.01■■□□□ 1.27
VRK2-205ENST00000432057 ANKIB1Q9P2G1 1089 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms