RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SASH1O94885 1247 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 GTF2IP78347 998 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 RASAL3Q86YV0 1011 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SRCIN1Q9C0H9 1055 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 C9orf78Q9NZ63 289 aaPredicted RBP11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
CDC42-IT1-201ENST00000431803 UTYO14607 1347 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 IL1R1P14778 569 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CCDC57Q2TAC2 916 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 PRAMEF18Q5VWM3 479 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ZNF594Q96JF6 807 aaPredicted RBP11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 FKBP1AP62942 108 aaKnown RBP11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 APOBEC3FQ8IUX4 373 aaKnown RBP11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 MTMR14Q8NCE2 650 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SUCLG2Q96I99 432 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CSRNP1Q96S65 589 aa11.9□□□□□ -0.5
CDC42-IT1-201ENST00000431803 E9PSI1 815 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ARSIQ5FYB1 569 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TAF7LQ5H9L4 462 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 MCOLN1Q9GZU1 580 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PTPRCP08575 1304 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 UBE2Q2LH0YL09 131 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 FOXK1P85037 733 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
CDC42-IT1-201ENST00000431803 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TRPA1O75762 1119 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 NF2P35240 595 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 DSG2Q14126 1118 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
CDC42-IT1-201ENST00000431803 HTTP42858 3142 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PLIN1O60240 522 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 DGKZQ13574 1117 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 LDLRAD1Q5T700 205 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TDRD7Q8NHU6 1098 aaKnown RBP11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PCDHAC2Q9Y5I4 1007 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PPP2R3BQ9Y5P8 575 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 AOX1Q06278 1338 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
CDC42-IT1-201ENST00000431803 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 F8W031 263 aaPredicted RBP11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 GYG1P46976 350 aa11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 FAM84BQ96KN1 310 aaPredicted RBP11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 PRMT6Q96LA8 375 aaPredicted RBP11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 JAG2Q9Y219 1238 aa11.85□□□□□ -0.51
CDC42-IT1-201ENST00000431803 SLC34A2O95436 690 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 HIBADHP31937 336 aaKnown RBP11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TM4SF4P48230 202 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 RGS19P49795 217 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 USP44Q9H0E7 712 aa11.84□□□□□ -0.51
CDC42-IT1-201ENST00000431803 LAMB1P07942 1786 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms