RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 CST9Q5W186 159 aa21.36■■□□□ 1.01
CTDSP1-203ENST00000431127 APOBEC3FQ8IUX4 373 aaKnown RBP21.36■■□□□ 1.01
CTDSP1-203ENST00000431127 CRKP46108 304 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 GRIK5Q16478 980 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 RHPN1Q8TCX5 695 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 TEKT1Q969V4 418 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 KIF1BPQ96EK5 621 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 PRMT6Q96LA8 375 aaPredicted RBP21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 ZNF408Q9H9D4 720 aa21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 ABT1Q9ULW3 272 aaKnown RBP21.35■■□□□ 1.01
CTDSP1-203ENST00000431127 COL1A1P02452 1464 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-203ENST00000431127 LDHBP07195 334 aaKnown RBP21.34■■□□□ 1.01
CTDSP1-203ENST00000431127 ARID4AP29374 1257 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-203ENST00000431127 TTC39AQ5SRH9 613 aa21.33■■□□□ 1.01
CTDSP1-203ENST00000431127 SPTY2D1Q68D10 685 aaPredicted RBP21.33■■□□□ 1.01
CTDSP1-203ENST00000431127 SPATA5Q8NB90 893 aa21.33■■□□□ 1.01
CTDSP1-203ENST00000431127 EAF2Q96CJ1 260 aaPredicted RBP21.33■■□□□ 1.01
CTDSP1-203ENST00000431127 DBNDD2Q9BQY9 259 aa21.33■■□□□ 1.01
CTDSP1-203ENST00000431127 FOXN1O15353 648 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 HHIPL2Q6UWX4 724 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 CLASRPQ8N2M8 674 aaKnown RBP21.32■■□□□ 1
CTDSP1-203ENST00000431127 CDCA5Q96FF9 252 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 ZNF512BQ96KM6 892 aaPredicted RBP21.32■■□□□ 1
CTDSP1-203ENST00000431127 ZDHHC15Q96MV8 337 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 CRBNQ96SW2 442 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 WBP1LQ9NX94 342 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 HMG20BQ9P0W2 317 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 PCDHAC2Q9Y5I4 1007 aa21.32■■□□□ 1
CTDSP1-203ENST00000431127 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
CTDSP1-203ENST00000431127 MYH13Q9UKX3 1938 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 TRPM7Q96QT4 1865 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 PRDX5P30044 214 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 AAMPQ13685 434 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 DLK2Q6UY11 383 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 AACSQ86V21 672 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
CTDSP1-203ENST00000431127 DBNLQ9UJU6 430 aaKnown RBP21.31■■□□□ 1
CTDSP1-203ENST00000431127 PPP2R3BQ9Y5P8 575 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 TLL2Q9Y6L7 1015 aa21.31■■□□□ 1
CTDSP1-203ENST00000431127 WDR33Q9C0J8 1336 aaKnown RBP21.3■■□□□ 1
CTDSP1-203ENST00000431127 APBB1O00213 710 aa21.3■■□□□ 1
CTDSP1-203ENST00000431127 TNFAIP1Q13829 316 aa21.3■■□□□ 1
CTDSP1-203ENST00000431127 C2orf69Q8N8R5 385 aa21.3■■□□□ 1
CTDSP1-203ENST00000431127 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
CTDSP1-203ENST00000431127 ABCF2Q9UG63 623 aa21.3■■□□□ 1
CTDSP1-203ENST00000431127 CLRN2A0PK11 232 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 NF2P35240 595 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 MCAMP43121 646 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 SPDYE2Q495Y8 402 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 SAPCD2Q86UD0 394 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 SLF2Q8IX21 1173 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 HHIPL1Q96JK4 782 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 DEFB129Q9H1M3 183 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 TDRD3Q9H7E2 651 aaKnown RBP21.29■■□□□ 1
CTDSP1-203ENST00000431127 VEZTQ9HBM0 779 aa21.29■■□□□ 1
CTDSP1-203ENST00000431127 GBA2Q9HCG7 927 aaPredicted RBP21.29■■□□□ 1
CTDSP1-203ENST00000431127 ZNF70Q9UC06 446 aaPredicted RBP21.29■■□□□ 1
CTDSP1-203ENST00000431127 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
CTDSP1-203ENST00000431127 CAPN15O75808 1086 aa21.28■■□□□ 1
CTDSP1-203ENST00000431127 CTCFP49711 727 aaPredicted RBP21.28■■□□□ 1
CTDSP1-203ENST00000431127 FKBP1BP68106 108 aa21.28■■□□□ 1
CTDSP1-203ENST00000431127 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
CTDSP1-203ENST00000431127 DZIP1Q86YF9 867 aaKnown RBP21.28■■□□□ 1
CTDSP1-203ENST00000431127 AIDAQ96BJ3 306 aa21.28■■□□□ 1
CTDSP1-203ENST00000431127 PRDM10Q9NQV6 1147 aa21.28■■□□□ 1
CTDSP1-203ENST00000431127 TLR7Q9NYK1 1049 aaKnown RBP21.28■■□□□ 1
CTDSP1-203ENST00000431127 IFIT2P09913 472 aaKnown RBP21.27■■□□□ 1
CTDSP1-203ENST00000431127 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
CTDSP1-203ENST00000431127 LRRCC1Q9C099 1032 aa21.27■■□□□ 1
CTDSP1-203ENST00000431127 DCTPP1Q9H773 170 aa21.27■■□□□ 1
CTDSP1-203ENST00000431127 TMOD2Q9NZR1 351 aa21.27■■□□□ 1
CTDSP1-203ENST00000431127 SUPT16HQ9Y5B9 1047 aaKnown RBP21.27■■□□□ 1
CTDSP1-203ENST00000431127 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
CTDSP1-203ENST00000431127 IGSF3O75054 1194 aa21.26■□□□□ 0.99
CTDSP1-203ENST00000431127 TNNI2P48788 182 aa21.26■□□□□ 0.99
CTDSP1-203ENST00000431127 MAP2K1Q02750 393 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-203ENST00000431127 PI16Q6UXB8 463 aa21.26■□□□□ 0.99
CTDSP1-203ENST00000431127 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
CTDSP1-203ENST00000431127 ECE1P42892 770 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 DIXDC1Q155Q3 683 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 SUPT20HL1Q3ZLR7 823 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 FKBP1CQ5VVH2 108 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 PRAMEF18Q5VWM3 479 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 LRP2BPQ9P2M1 347 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 AOX1Q06278 1338 aa21.25■□□□□ 0.99
CTDSP1-203ENST00000431127 HUNKP57058 714 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 GSTO1P78417 241 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 RASA3Q14644 834 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 PAXIP1Q6ZW49 1069 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 FAM163AQ96GL9 167 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 SNRKQ9NRH2 765 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 RAI14Q9P0K7 980 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 ECM29Q5VYK3 1845 aa21.24■□□□□ 0.99
CTDSP1-203ENST00000431127 LDHCP07864 332 aa21.23■□□□□ 0.99
CTDSP1-203ENST00000431127 MECOMQ03112 1051 aa21.23■□□□□ 0.99
CTDSP1-203ENST00000431127 TBC1D9Q6ZT07 1266 aa21.23■□□□□ 0.99
CTDSP1-203ENST00000431127 CAPNS2Q96L46 248 aa21.23■□□□□ 0.99
CTDSP1-203ENST00000431127 TCP10L2B9ZVM9 353 aa21.22■□□□□ 0.99
CTDSP1-203ENST00000431127 ZAP70P43403 619 aa21.22■□□□□ 0.99
CTDSP1-203ENST00000431127 LBX1P52954 281 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms