RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 FZD1Q9UP38 647 aa17.01■□□□□ 0.31
GCSHP3-201ENST00000431120 LAMB1P07942 1786 aa17■□□□□ 0.31
GCSHP3-201ENST00000431120 TESPA1A2RU30 521 aaPredicted RBP17■□□□□ 0.31
GCSHP3-201ENST00000431120 FRAT2O75474 233 aaPredicted RBP17■□□□□ 0.31
GCSHP3-201ENST00000431120 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
GCSHP3-201ENST00000431120 USP44Q9H0E7 712 aa17■□□□□ 0.31
GCSHP3-201ENST00000431120 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
GCSHP3-201ENST00000431120 MAST3O60307 1309 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 AOX1Q06278 1338 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 SLC34A2O95436 690 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 FKBP1CQ5VVH2 108 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 TEPSINQ96N21 525 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 ARAP2Q8WZ64 1704 aa16.99■□□□□ 0.31
GCSHP3-201ENST00000431120 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 ERO1AQ96HE7 468 aa16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
GCSHP3-201ENST00000431120 FGFR2P21802 821 aa16.97■□□□□ 0.31
GCSHP3-201ENST00000431120 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
GCSHP3-201ENST00000431120 ZDHHC15Q96MV8 337 aa16.97■□□□□ 0.31
GCSHP3-201ENST00000431120 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
GCSHP3-201ENST00000431120 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
GCSHP3-201ENST00000431120 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 EYA2O00167 538 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 FAM83AQ86UY5 434 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 LPIN2Q92539 896 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 OPTNQ96CV9 577 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 CSADQ9Y600 493 aa16.96■□□□□ 0.31
GCSHP3-201ENST00000431120 GJA5P36382 358 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 BCAMP50895 628 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 GTF2A2P52657 109 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 TMEM39BQ9GZU3 492 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 IQSEC3Q9UPP2 1182 aaPredicted RBP16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 TRIM17Q9Y577 477 aa16.95■□□□□ 0.3
GCSHP3-201ENST00000431120 TNRC18O15417 2968 aaPredicted RBP16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 SLC5A1P13866 664 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 CRHR2Q13324 411 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 ARHGEF6Q15052 776 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 OTOP1Q7RTM1 612 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 KLHDC4Q8TBB5 520 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
GCSHP3-201ENST00000431120 RPAP1Q9BWH6 1393 aaPredicted RBP16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 ZBTB22O15209 634 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 CIAO1O76071 339 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 SP3Q02447 781 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 VGLL4Q14135 290 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 GRIK5Q16478 980 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 PTPN18Q99952 460 aa16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 ZCCHC17Q9NP64 241 aaKnown RBP16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
GCSHP3-201ENST00000431120 SPDYE5A6NIY4 337 aa16.92■□□□□ 0.3
GCSHP3-201ENST00000431120 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
GCSHP3-201ENST00000431120 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
GCSHP3-201ENST00000431120 APOBEC3HQ6NTF7 200 aaKnown RBP16.92■□□□□ 0.3
GCSHP3-201ENST00000431120 DCAF15Q66K64 600 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 ERO1BQ86YB8 467 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 EFCC1Q9HA90 598 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 ZFYVE28Q9HCC9 887 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 GNL3LQ9NVN8 582 aaKnown RBP16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
GCSHP3-201ENST00000431120 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 CCL15-CCL14A0A0B4J2E2 113 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 SEMA3EO15041 775 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 CCL15Q16663 113 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 CEP126Q9P2H0 1117 aa16.9■□□□□ 0.3
GCSHP3-201ENST00000431120 CETPP11597 493 aa16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 TAF1CQ15572 869 aaPredicted RBP16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 SALL1Q9NSC2 1324 aa16.89■□□□□ 0.29
GCSHP3-201ENST00000431120 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 CACNB3P54284 484 aa16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 ATP2B3Q16720 1220 aa16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 CD99L2Q8TCZ2 262 aa16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 FAM151AQ8WW52 585 aa16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 ARMC5Q96C12 935 aa16.88■□□□□ 0.29
GCSHP3-201ENST00000431120 ZNF341Q9BYN7 854 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms