RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 TTF2Q9UNY4 1162 aaKnown RBP21.5■■□□□ 1.03
CTSD-203ENST00000429746 CELF2O95319 508 aaKnown RBP21.49■■□□□ 1.03
CTSD-203ENST00000429746 PRDX5P30044 214 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 NEUROD6Q96NK8 337 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 SERPINA10Q9UK55 444 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 HDAC9Q9UKV0 1011 aa21.49■■□□□ 1.03
CTSD-203ENST00000429746 MCAMP43121 646 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 SAPCD2Q86UD0 394 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 WDR66Q8TBY9 1149 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 RHPN1Q8TCX5 695 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 ZNF384Q8TF68 577 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 DCPSQ96C86 337 aaKnown RBP21.48■■□□□ 1.03
CTSD-203ENST00000429746 HMG20BQ9P0W2 317 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 DENND2AQ9ULE3 1009 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 SUGT1Q9Y2Z0 365 aa21.48■■□□□ 1.03
CTSD-203ENST00000429746 CRKP46108 304 aa21.47■■□□□ 1.03
CTSD-203ENST00000429746 HDLBPQ00341 1268 aaKnown RBP21.47■■□□□ 1.03
CTSD-203ENST00000429746 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
CTSD-203ENST00000429746 CAPNS2Q96L46 248 aa21.47■■□□□ 1.03
CTSD-203ENST00000429746 MRIQ9BWK5 157 aa21.47■■□□□ 1.03
CTSD-203ENST00000429746 PRDM10Q9NQV6 1147 aa21.47■■□□□ 1.03
CTSD-203ENST00000429746 SSC5DA1L4H1 1573 aa21.46■■□□□ 1.03
CTSD-203ENST00000429746 FRAT2O75474 233 aaPredicted RBP21.46■■□□□ 1.03
CTSD-203ENST00000429746 MAP2K2P36507 400 aa21.46■■□□□ 1.03
CTSD-203ENST00000429746 CTCFP49711 727 aaPredicted RBP21.46■■□□□ 1.03
CTSD-203ENST00000429746 DLGAP5Q15398 846 aa21.46■■□□□ 1.03
CTSD-203ENST00000429746 GNL3LQ9NVN8 582 aaKnown RBP21.46■■□□□ 1.03
CTSD-203ENST00000429746 MYH2Q9UKX2 1941 aa21.45■■□□□ 1.02
CTSD-203ENST00000429746 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
CTSD-203ENST00000429746 HMMRO75330 724 aa21.45■■□□□ 1.02
CTSD-203ENST00000429746 APOBEC3HQ6NTF7 200 aaKnown RBP21.45■■□□□ 1.02
CTSD-203ENST00000429746 CDCA5Q96FF9 252 aa21.45■■□□□ 1.02
CTSD-203ENST00000429746 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
CTSD-203ENST00000429746 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
CTSD-203ENST00000429746 IL1RAPL2Q9NP60 686 aa21.45■■□□□ 1.02
CTSD-203ENST00000429746 FOXN1O15353 648 aa21.44■■□□□ 1.02
CTSD-203ENST00000429746 SPDYE2Q495Y8 402 aa21.44■■□□□ 1.02
CTSD-203ENST00000429746 ERC1Q8IUD2 1116 aa21.44■■□□□ 1.02
CTSD-203ENST00000429746 SULF1Q8IWU6 871 aa21.44■■□□□ 1.02
CTSD-203ENST00000429746 DOCK2Q92608 1830 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 DIXDC1Q155Q3 683 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 PRAMEF18Q5VWM3 479 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 HHIPL2Q6UWX4 724 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 TNS4Q8IZW8 715 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 SPATA5Q8NB90 893 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 ZDHHC15Q96MV8 337 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 DCTPP1Q9H773 170 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 MAST2Q6P0Q8 1798 aa21.43■■□□□ 1.02
CTSD-203ENST00000429746 CLRN2A0PK11 232 aa21.42■■□□□ 1.02
CTSD-203ENST00000429746 HSP90AB4PQ58FF6 505 aa21.42■■□□□ 1.02
CTSD-203ENST00000429746 PAXIP1Q6ZW49 1069 aaPredicted RBP21.42■■□□□ 1.02
CTSD-203ENST00000429746 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
CTSD-203ENST00000429746 PAPPA2Q9BXP8 1791 aa21.42■■□□□ 1.02
CTSD-203ENST00000429746 TDRD3Q9H7E2 651 aaKnown RBP21.42■■□□□ 1.02
CTSD-203ENST00000429746 ZNF70Q9UC06 446 aaPredicted RBP21.42■■□□□ 1.02
CTSD-203ENST00000429746 DAGLAQ9Y4D2 1042 aa21.42■■□□□ 1.02
CTSD-203ENST00000429746 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
CTSD-203ENST00000429746 GAKO14976 1311 aa21.41■■□□□ 1.02
CTSD-203ENST00000429746 RAB11FIP3O75154 756 aa21.41■■□□□ 1.02
CTSD-203ENST00000429746 CYP4F22Q6NT55 531 aa21.41■■□□□ 1.02
CTSD-203ENST00000429746 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
CTSD-203ENST00000429746 TEKT1Q969V4 418 aa21.41■■□□□ 1.02
CTSD-203ENST00000429746 RFX7Q2KHR2 1363 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 AACSQ86V21 672 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 APOBEC3FQ8IUX4 373 aaKnown RBP21.4■■□□□ 1.02
CTSD-203ENST00000429746 CDAN1Q8IWY9 1227 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 C2orf69Q8N8R5 385 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 BEGAINQ9BUH8 593 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 ZNF408Q9H9D4 720 aa21.4■■□□□ 1.02
CTSD-203ENST00000429746 MAST3O60307 1309 aa21.39■■□□□ 1.01
CTSD-203ENST00000429746 APBB1O00213 710 aa21.39■■□□□ 1.01
CTSD-203ENST00000429746 CYP2E1P05181 493 aaPredicted RBP21.39■■□□□ 1.01
CTSD-203ENST00000429746 LDHBP07195 334 aaKnown RBP21.39■■□□□ 1.01
CTSD-203ENST00000429746 TEPSINQ96N21 525 aa21.39■■□□□ 1.01
CTSD-203ENST00000429746 DEFB129Q9H1M3 183 aa21.39■■□□□ 1.01
CTSD-203ENST00000429746 SNRKQ9NRH2 765 aa21.39■■□□□ 1.01
CTSD-203ENST00000429746 CA12O43570 354 aa21.38■■□□□ 1.01
CTSD-203ENST00000429746 RBM5P52756 815 aaKnown RBP eCLIP21.38■■□□□ 1.01
CTSD-203ENST00000429746 GORABQ5T7V8 394 aa21.38■■□□□ 1.01
CTSD-203ENST00000429746 EXOC6Q8TAG9 804 aa21.38■■□□□ 1.01
CTSD-203ENST00000429746 FAM163AQ96GL9 167 aaPredicted RBP21.38■■□□□ 1.01
CTSD-203ENST00000429746 GBA2Q9HCG7 927 aaPredicted RBP21.38■■□□□ 1.01
CTSD-203ENST00000429746 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
CTSD-203ENST00000429746 ZAP70P43403 619 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 HUNKP57058 714 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 MECOMQ03112 1051 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 NOGQ13253 232 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 TTC39AQ5SRH9 613 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 NSUN4Q96CB9 384 aaKnown RBP21.37■■□□□ 1.01
CTSD-203ENST00000429746 NDUFB9Q9Y6M9 179 aa21.37■■□□□ 1.01
CTSD-203ENST00000429746 OTOFQ9HC10 1997 aa21.36■■□□□ 1.01
CTSD-203ENST00000429746 CACNB3P54284 484 aa21.36■■□□□ 1.01
CTSD-203ENST00000429746 FKBP1BP68106 108 aa21.36■■□□□ 1.01
CTSD-203ENST00000429746 MOB2Q70IA6 237 aa21.36■■□□□ 1.01
CTSD-203ENST00000429746 ZGPATQ8N5A5 531 aaKnown RBP21.36■■□□□ 1.01
CTSD-203ENST00000429746 PIH1D3Q9NQM4 214 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms