RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 MIER1Q8N108 512 aa34■■■■□ 3.03
LMO1-202ENST00000428101 HDAC5Q9UQL6 1122 aa34■■■■□ 3.03
LMO1-202ENST00000428101 PPP1R12BO60237 982 aaPredicted RBP33.99■■■■□ 3.03
LMO1-202ENST00000428101 SLC5A1P13866 664 aa33.99■■■■□ 3.03
LMO1-202ENST00000428101 DGKZQ13574 1117 aa33.99■■■■□ 3.03
LMO1-202ENST00000428101 HDLBPQ00341 1268 aaKnown RBP33.98■■■■□ 3.03
LMO1-202ENST00000428101 SPRYD7Q5W111 196 aa33.98■■■■□ 3.03
LMO1-202ENST00000428101 MYH13Q9UKX3 1938 aa33.98■■■■□ 3.03
LMO1-202ENST00000428101 TNFAIP1Q13829 316 aa33.97■■■■□ 3.03
LMO1-202ENST00000428101 PA2G4Q9UQ80 394 aaKnown RBP33.97■■■■□ 3.03
LMO1-202ENST00000428101 CLMNQ96JQ2 1002 aa33.96■■■■□ 3.03
LMO1-202ENST00000428101 USP2O75604 605 aaPredicted RBP33.95■■■■□ 3.03
LMO1-202ENST00000428101 BCAR3O75815 825 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 SLC10A4Q96EP9 437 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 TEPSINQ96N21 525 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 MRIQ9BWK5 157 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 CEP126Q9P2H0 1117 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 SUGT1Q9Y2Z0 365 aa33.95■■■■□ 3.03
LMO1-202ENST00000428101 TRIM27P14373 513 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 CDAN1Q8IWY9 1227 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 TEKT1Q969V4 418 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 COPRSQ9NQ92 184 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 TNNQ9UQP3 1299 aa33.94■■■■□ 3.02
LMO1-202ENST00000428101 UNCXA6NJT0 531 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 CCDC85CA6NKD9 419 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 TCP10L2B9ZVM9 353 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 IL15P40933 162 aaPredicted RBP33.93■■■■□ 3.02
LMO1-202ENST00000428101 ATP2B3Q16720 1220 aa33.93■■■■□ 3.02
LMO1-202ENST00000428101 IPO8O15397 1037 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 TBC1D8O95759 1140 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 GNAI3P08754 354 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 IREB2P48200 963 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 SREBF2Q12772 1141 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 DIEXFQ68CQ4 756 aaKnown RBP33.92■■■■□ 3.02
LMO1-202ENST00000428101 ZDHHC15Q96MV8 337 aa33.92■■■■□ 3.02
LMO1-202ENST00000428101 ATF7IPQ6VMQ6 1270 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 WNK4Q96J92 1243 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 TMEM39BQ9GZU3 492 aa33.91■■■■□ 3.02
LMO1-202ENST00000428101 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.91■■■■□ 3.02
LMO1-202ENST00000428101 APOBEC3HQ6NTF7 200 aaKnown RBP33.9■■■■□ 3.02
LMO1-202ENST00000428101 WDR66Q8TBY9 1149 aa33.9■■■■□ 3.02
LMO1-202ENST00000428101 LAMB1P07942 1786 aa33.9■■■■□ 3.02
LMO1-202ENST00000428101 OTOFQ9HC10 1997 aa33.89■■■■□ 3.02
LMO1-202ENST00000428101 MAST3O60307 1309 aa33.89■■■■□ 3.02
LMO1-202ENST00000428101 FRAT1Q92837 279 aaPredicted RBP33.89■■■■□ 3.02
LMO1-202ENST00000428101 ZBTB48P10074 688 aaPredicted RBP33.88■■■■□ 3.01
LMO1-202ENST00000428101 TNNI2P48788 182 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 CACNB3P54284 484 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 HHIPL2Q6UWX4 724 aa33.88■■■■□ 3.01
LMO1-202ENST00000428101 HNRNPUQ00839 825 aaKnown RBP eCLIP33.87■■■■□ 3.01
LMO1-202ENST00000428101 MTX1Q13505 466 aa33.87■■■■□ 3.01
LMO1-202ENST00000428101 ANKRD13AQ8IZ07 590 aa33.87■■■■□ 3.01
LMO1-202ENST00000428101 MANSC4A6NHS7 340 aaPredicted RBP33.86■■■■□ 3.01
LMO1-202ENST00000428101 SRGAP3O43295 1099 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 GJA5P36382 358 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 CFHR5Q9BXR6 569 aa33.86■■■■□ 3.01
LMO1-202ENST00000428101 PHKA1P46020 1223 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 ZNF296Q8WUU4 475 aaPredicted RBP33.85■■■■□ 3.01
LMO1-202ENST00000428101 CLUAP1Q96AJ1 413 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 R3HDMLQ9H3Y0 253 aa33.85■■■■□ 3.01
LMO1-202ENST00000428101 ADORA1P30542 326 aa33.84■■■■□ 3.01
LMO1-202ENST00000428101 INHBEP58166 350 aa33.84■■■■□ 3.01
LMO1-202ENST00000428101 NOM1Q5C9Z4 860 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 CTU1Q7Z7A3 348 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 GNL3LQ9NVN8 582 aaKnown RBP33.84■■■■□ 3.01
LMO1-202ENST00000428101 GPR25O00155 361 aa33.83■■■■□ 3.01
LMO1-202ENST00000428101 PRDX5P30044 214 aa33.82■■■■□ 3
LMO1-202ENST00000428101 FKBP1CQ5VVH2 108 aa33.82■■■■□ 3
LMO1-202ENST00000428101 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.82■■■■□ 3
LMO1-202ENST00000428101 IFNL1Q8IU54 200 aa33.82■■■■□ 3
LMO1-202ENST00000428101 ZBTB22O15209 634 aa33.81■■■■□ 3
LMO1-202ENST00000428101 TIMM10P62072 90 aa33.81■■■■□ 3
LMO1-202ENST00000428101 CCDC102BQ68D86 513 aa33.81■■■■□ 3
LMO1-202ENST00000428101 FAM83AQ86UY5 434 aa33.81■■■■□ 3
LMO1-202ENST00000428101 TMOD2Q9NZR1 351 aa33.81■■■■□ 3
LMO1-202ENST00000428101 DENND2AQ9ULE3 1009 aa33.81■■■■□ 3
LMO1-202ENST00000428101 SALL1Q9NSC2 1324 aa33.8■■■■□ 3
LMO1-202ENST00000428101 IGF2BP3O00425 579 aaKnown RBP eCLIP33.8■■■■□ 3
LMO1-202ENST00000428101 SEMA3EO15041 775 aa33.8■■■■□ 3
LMO1-202ENST00000428101 ALDH1A1P00352 501 aa33.8■■■■□ 3
LMO1-202ENST00000428101 GNAI2P04899 355 aa33.8■■■■□ 3
LMO1-202ENST00000428101 ELP3Q9H9T3 547 aa33.8■■■■□ 3
LMO1-202ENST00000428101 DAGLAQ9Y4D2 1042 aa33.8■■■■□ 3
LMO1-202ENST00000428101 TFCP2Q12800 502 aa33.79■■■■□ 3
LMO1-202ENST00000428101 DIXDC1Q155Q3 683 aa33.79■■■■□ 3
LMO1-202ENST00000428101 TMEM57Q8N5G2 664 aa33.79■■■■□ 3
LMO1-202ENST00000428101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.79■■■■□ 3
LMO1-202ENST00000428101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.79■■■■□ 3
LMO1-202ENST00000428101 RGS19P49795 217 aa33.78■■■■□ 3
LMO1-202ENST00000428101 MAP3K9P80192 1104 aa33.78■■■■□ 3
LMO1-202ENST00000428101 ZKSCAN2Q63HK3 967 aa33.78■■■■□ 3
LMO1-202ENST00000428101 OPTNQ96CV9 577 aa33.78■■■■□ 3
LMO1-202ENST00000428101 LDHBP07195 334 aaKnown RBP33.77■■■■□ 3
LMO1-202ENST00000428101 VGLL4Q14135 290 aa33.77■■■■□ 3
LMO1-202ENST00000428101 PNMA6EA0A0J9YXQ4 647 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 A0A1B0GUL7 405 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 CNKSR2Q8WXI2 1034 aa33.76■■■□□ 2.99
LMO1-202ENST00000428101 TESPA1A2RU30 521 aaPredicted RBP33.75■■■□□ 2.99
LMO1-202ENST00000428101 CDC42EP5Q6NZY7 148 aa33.75■■■□□ 2.99
LMO1-202ENST00000428101 XAGE2Q96GT9 111 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms